Pairwise Alignments

Query, 251 a.a., 3-deoxy-D-manno-octulosonic acid kinase from Vibrio cholerae E7946 ATCC 55056

Subject, 250 a.a., conserved hypothetical protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  144 bits (362), Expect = 2e-39
 Identities = 77/194 (39%), Positives = 115/194 (59%), Gaps = 7/194 (3%)

Query: 46  EFWQQNGKVLGSATGRGTTWFVQLQQTQGALRHYRRGGLFGKLVADSYWFTGWEKTRSYQ 105
           +FW++   V+GS+ GR TTWFV  + +   LRHY RGG+  K   D+Y++TG E TR+  
Sbjct: 33  DFWREKSAVVGSSKGRYTTWFVAFEHSHWVLRHYWRGGMMEKFSKDAYFYTGLENTRAMG 92

Query: 106 EFMLLNHLRDAGVNVPRPIAARVQKHGLLYKADLLSEKVPNARDLVSILQESPISDELYR 165
           E  LL+ L      VP+PIAA + + GL Y+AD++ E+V  A DLV+ L +  ++   + 
Sbjct: 93  ELRLLDALYREQFAVPKPIAANIVRDGLFYRADIIIERVDGAEDLVAKLTKGTMTQAQWH 152

Query: 166 KIGREIRKMHDAQVNHTDLNIHNILIDD------QEKVWIIDFDKCYVQIGDS-WKQGNL 218
            +G  I + H   V H DLN  NIL         QE+ ++IDFD+  ++  ++ W++ NL
Sbjct: 153 ALGATIAQFHRRGVYHADLNAKNILWQPQQTDSAQERFYLIDFDRGELKTPNAKWQKANL 212

Query: 219 KRLKRSFEKEVCKR 232
            RL RSF KE  K+
Sbjct: 213 DRLLRSFNKEQGKQ 226