Pairwise Alignments

Query, 345 a.a., ADP-heptose--LPS heptosyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 359 a.a., glycosyl transferase family protein (RefSeq) from Shewanella loihica PV-4

 Score = 49.3 bits (116), Expect = 2e-10
 Identities = 61/288 (21%), Positives = 115/288 (39%), Gaps = 21/288 (7%)

Query: 4   LLVIRNDKIGDFMLAWPSFAMLKASLPDCHITALVPKYTAALAELCPWIDAVIIDPGQQA 63
           L ++R   IGD   A      ++   PD  IT ++ K    L +  P ++ VI D  Q  
Sbjct: 11  LCLLRLSAIGDVCHAVAMVQAIQRQYPDLKITWVIGKVEYQLLKHLPGVEFVIFDKSQ-- 68

Query: 64  DKAQHKQLVQTVKAQQFD----ASINLFSTMYNALLVWKARIPYRLAPATKLAQIFYQHR 119
               +  L + +K ++FD      + L +T+ +  +  K R+ +  A A +   +    R
Sbjct: 69  GWRSYFNLRRALKGRRFDLLLHMQVALRATIASLAISAKVRLGFDRARAKEGQWLVTNRR 128

Query: 120 IKQKRSQSAKPEYEYNLDLVRAFLRDIGQPIIEPNAPYLTFPAEQLAAQRSKLAEQLDIG 179
           ++   +        + L+    F + +G   ++P        A+      ++ A QL   
Sbjct: 129 VEPLAT-------PHVLEGFMGFAKAVGVTDLKPKWEIPVPVAD------TEFARQLIPD 175

Query: 180 PDKAWLFVHAGSGGSANNLSLEQYCELVTGVMDEHKQVVLTAGPGEEEKAAQLQSLLAEQ 239
            DK  +   A S    N L  E+Y ++    +++  +V+L  GP   E+    +++L+  
Sbjct: 176 GDKILVICAAASKAERNWLP-ERYAQVADHALEKGYRVLLCGGPVPIEREL-AEAILSHG 233

Query: 240 GVLAALYAKNDGLVDFTRSLACAQLFIAGSTGPLHIAAALDVPTVGFF 287
                       L      L  A + +A  TGP H+A     P +G +
Sbjct: 234 DPRIENQVGKTSLTQLLALLKQASIVLAPDTGPAHMAVTQGTPVIGLY 281