Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 270 a.a., Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23) from Pseudomonas fluorescens FW300-N2E2

 Score =  289 bits (739), Expect = 5e-83
 Identities = 143/269 (53%), Positives = 189/269 (70%), Gaps = 1/269 (0%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELK-QLEGQTILAIHRRAKYL 59
           MPELPEVE +R GI+PHL G  +  +V+R  +LRWPIP++L  +L GQ I+ + RRAKYL
Sbjct: 1   MPELPEVETTRRGIAPHLEGQRVSRVVVRDRRLRWPIPEDLDVRLSGQRIVQVERRAKYL 60

Query: 60  IIETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCAP 119
           +I   VG+ I HLGMSG+LR+++   PAAKH+HVD+ + SG  LRY DPRRFGA LW   
Sbjct: 61  LINAEVGTLISHLGMSGNLRLVEVGMPAAKHEHVDIELESGLALRYTDPRRFGAMLWSLD 120

Query: 120 DESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLFTS 179
             +HE+L RLGPEPLT+ F+ E +   +R + +AVK FIMDNA VVGVGNIYA E+LF +
Sbjct: 121 PFNHELLIRLGPEPLTDLFDGERLFQLSRGRSMAVKPFIMDNAVVVGVGNIYATEALFAA 180

Query: 180 RLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGK 239
            + P R A  +S   +  L   IK++L  AI++GGTTL+DF   DG+PGYF QEL VYG+
Sbjct: 181 GIDPRRAAGGISRARYLKLAIEIKRILAHAIERGGTTLRDFIGGDGQPGYFQQELFVYGR 240

Query: 240 AKQPCPHCGEPLCEQKIAQRNTFFCPQCQ 268
             + C  CG  L E ++ QR + +CP+CQ
Sbjct: 241 GGELCKVCGTGLREIRLGQRASVWCPRCQ 269