Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., formamidopyrimidine-DNA glycosylase (RefSeq) from Shewanella amazonensis SB2B

 Score =  321 bits (823), Expect = 9e-93
 Identities = 151/269 (56%), Positives = 196/269 (72%), Gaps = 1/269 (0%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTILAIHRRAKYLI 60
           MPELPEVEV+R GI+PHL G  +++L++R   LRWP+P+  + + GQTIL + RRAKYL+
Sbjct: 1   MPELPEVEVTRQGIAPHLEGNRVEALIVRNANLRWPVPELAQNIVGQTILGVRRRAKYLL 60

Query: 61  IETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWCA-P 119
           I+T  G+ IVHLGMSGSLR+L  + P  KHDH+DLVM +G+ LR+NDPRRFGAWLW   P
Sbjct: 61  IDTQAGTTIVHLGMSGSLRVLPKNTPVEKHDHIDLVMQNGRVLRFNDPRRFGAWLWSELP 120

Query: 120 DESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLFTS 179
           + +H +L +LGPEPL+ AF+A+Y+    + K+ A+K  +MDNA VVGVGNIYANE+LF +
Sbjct: 121 EAAHPLLEKLGPEPLSAAFHADYLQAALKGKKKAIKLCLMDNAIVVGVGNIYANEALFAA 180

Query: 180 RLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGK 239
            +HP   A  +  E    L A +K +L  AIKQGGTTLKDFT +DGKPGYFAQ+L VYG+
Sbjct: 181 GIHPEAEAGKVDAERLTLLTAEVKTILTQAIKQGGTTLKDFTNADGKPGYFAQKLHVYGR 240

Query: 240 AKQPCPHCGEPLCEQKIAQRNTFFCPQCQ 268
             + C  CG  L E ++ QR T FC  CQ
Sbjct: 241 GGETCTECGHLLSEIRLGQRTTVFCSLCQ 269