Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 281 a.a., DNA-formamidopyrimidine glycosylase (NCBI) from Rhodospirillum rubrum S1H

 Score =  210 bits (534), Expect = 3e-59
 Identities = 118/280 (42%), Positives = 171/280 (61%), Gaps = 12/280 (4%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQ-LEGQTILAIHRRAKYL 59
           MPELPEVE  RLG++P LVG  +  +  R P LR PIP +L Q L G+ + ++ RRAKYL
Sbjct: 1   MPELPEVETVRLGLTPALVGERLSRVAARRPALRLPIPVDLVQRLTGKVVGSLDRRAKYL 60

Query: 60  IIETAVGS-AIVHLGMSGSLRI--LDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLW 116
           ++    G  A++HLGMSGS+ +  L G      HDH+     +G R+ + DPRRFG    
Sbjct: 61  LLRMIDGPVALIHLGMSGSMTVGPLAGHAEPGPHDHILFETEAGLRVTFRDPRRFGLITL 120

Query: 117 CAPD--ESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANE 174
             P+  + H +L +LGPEPL+EAF+AE ++ +   ++  +KA ++D   V G+GNIY +E
Sbjct: 121 AEPETLDDHPLLAKLGPEPLSEAFDAEVLVRRLNGRQAPIKAALLDQGVVAGLGNIYVSE 180

Query: 175 SLFTSRLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQEL 234
           +LF + + PLRPA S++    + LVA I+ VL  AI  GG++L+D  Q+DG  GYF    
Sbjct: 181 ALFRAGISPLRPAASVTGAWAEALVAAIRAVLGEAIAAGGSSLRDHRQTDGALGYFQHRF 240

Query: 235 QVYGKAKQPCPHCGEPLCE----QKIAQ--RNTFFCPQCQ 268
            VY +  QPCP C   +      +++ Q  R+TFFC + Q
Sbjct: 241 AVYDRVGQPCPGCDCDVARTGGIERMVQSGRSTFFCGRRQ 280