Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 283 a.a., formamidopyrimidine-DNA glycosylase MutM from Phaeobacter inhibens DSM 17395

 Score =  203 bits (516), Expect = 4e-57
 Identities = 112/282 (39%), Positives = 166/282 (58%), Gaps = 14/282 (4%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQEL-KQLEGQTILAIHRRAKYL 59
           MPELPEVE  R G+SP + G  I+   +  P LRWP P+ + ++L G+ + A+ RR+KY+
Sbjct: 1   MPELPEVETVRRGLSPAMEGAVIKKAAVNRPDLRWPFPERMAERLTGRCVTALRRRSKYI 60

Query: 60  IIETAVGSAI-VHLGMSGSLRILDG-------DFPAA-KHDHVDLVMTSGKRLRYNDPRR 110
           + +   G  + VHLGMSG + +          D P A KHDHV   M +G R+ +NDPRR
Sbjct: 61  LADLDSGETLLVHLGMSGRMTVSGDPLGRFVHDHPKAQKHDHVVFDMDNGARITFNDPRR 120

Query: 111 FGAW--LWCAPDESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVG 168
           FGA   L  A  + H++L  LGPEPL  +F+ E+++   + +   VK+ ++D   + G+G
Sbjct: 121 FGAMDLLETATADQHKLLAVLGPEPLGNSFHEEHLIAAFKGRNTPVKSALLDQGIIAGLG 180

Query: 169 NIYANESLFTSRLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPG 228
           NIY  E+LF + + P R A  ++ +    LV  IK VL  AIK GG++LKDF Q+DG+ G
Sbjct: 181 NIYVCEALFRAGISPQRKAGQIAAQRVGALVPIIKDVLTDAIKAGGSSLKDFRQADGELG 240

Query: 229 YFAQELQVYGKAKQPC--PHCGEPLCEQKIAQRNTFFCPQCQ 268
           YF     VYG+  +PC    C   +     + R++F+C +CQ
Sbjct: 241 YFQHSFDVYGREGEPCRRAKCDGTVGRITQSGRSSFYCGKCQ 282