Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 275 a.a., formamidopyrimidine-DNA glycosylase Fpg from Dechlorosoma suillum PS

 Score =  219 bits (559), Expect = 4e-62
 Identities = 120/275 (43%), Positives = 166/275 (60%), Gaps = 8/275 (2%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLE-GQTILAIHRRAKYL 59
           MPELPEVEVSRLG+ P+L G  +Q + LR P+LR  +   L +   G+ +  + RR KYL
Sbjct: 1   MPELPEVEVSRLGLLPYLPGQVLQGVSLRAPRLRHELSPALAERPVGRRLKRVERRGKYL 60

Query: 60  IIETAV----GSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWL 115
           + +       G  I+HLGMSGSLR++    P +KHDHVDL    G+ LRY DPRRFG  L
Sbjct: 61  LFDFESDGGGGWIILHLGMSGSLRLVPPGTPPSKHDHVDLHFP-GRTLRYRDPRRFGTLL 119

Query: 116 WCAPDE--SHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYAN 173
           W        H +L  LG EPL++AF+  ++    R ++  +K  +MD   +VGVGNIYA 
Sbjct: 120 WVDGPVVLDHPLLAPLGVEPLSDAFDGAWLHQALRRRQAPIKQVLMDAHCIVGVGNIYAA 179

Query: 174 ESLFTSRLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQE 233
           ESLF SR+ PL PA  LS +    L A +++VL  +I  GG++++D+  SDG  G F   
Sbjct: 180 ESLFRSRISPLTPACRLSRQRCDRLAATVREVLAESIAAGGSSVRDYVHSDGGAGSFQLI 239

Query: 234 LQVYGKAKQPCPHCGEPLCEQKIAQRNTFFCPQCQ 268
           + VY +  +PC  CG P+       R+TF+CP+CQ
Sbjct: 240 VAVYDREGEPCQVCGGPIRRITQGGRSTFYCPRCQ 274