Pairwise Alignments

Query, 269 a.a., formamidopyrimidine-DNA glycosylase from Vibrio cholerae E7946 ATCC 55056

Subject, 271 a.a., formamidopyrimidine-DNA glycosylase (RefSeq) from Shewanella sp. ANA-3

 Score =  327 bits (839), Expect = 1e-94
 Identities = 157/269 (58%), Positives = 197/269 (73%), Gaps = 1/269 (0%)

Query: 1   MPELPEVEVSRLGISPHLVGGTIQSLVLRTPKLRWPIPQELKQLEGQTILAIHRRAKYLI 60
           MPELPEVEV+R GI+PHLV  T+  LV+R   LRWP+P+  KQ+ GQTI  + RRAKYL+
Sbjct: 1   MPELPEVEVTRQGIAPHLVEQTVVDLVIRNASLRWPVPELAKQIIGQTIRQVRRRAKYLL 60

Query: 61  IETAVGSAIVHLGMSGSLRILDGDFPAAKHDHVDLVMTSGKRLRYNDPRRFGAWLWC-AP 119
           I+T  G++IVHLGMSGSLRIL  D P  KHDH+DLV+ +G+ LR+NDPRRFGAWLWC  P
Sbjct: 61  IDTDAGTSIVHLGMSGSLRILPHDTPVEKHDHIDLVLANGRILRFNDPRRFGAWLWCQLP 120

Query: 120 DESHEVLGRLGPEPLTEAFNAEYMMDKARNKRIAVKAFIMDNAAVVGVGNIYANESLFTS 179
           +E+H +L +LGPEPLT+AFN   +      K+ A+K  +MDN  VVGVGNIYANE+LF +
Sbjct: 121 EEAHPLLEKLGPEPLTDAFNVNQLAAALAGKKKAIKLCLMDNHIVVGVGNIYANEALFAA 180

Query: 180 RLHPLRPAHSLSLEEWQTLVANIKQVLQVAIKQGGTTLKDFTQSDGKPGYFAQELQVYGK 239
            +HP   A  + +E    LVA +KQ+L  AIKQGGTTLKDFT ++GKPGYFAQ+L VYG+
Sbjct: 181 GIHPEAEAGKIDIERLTVLVAEVKQILAHAIKQGGTTLKDFTNAEGKPGYFAQKLHVYGR 240

Query: 240 AKQPCPHCGEPLCEQKIAQRNTFFCPQCQ 268
             + C  CG  L E ++ QR T FC  CQ
Sbjct: 241 GGETCTQCGNLLSEIRLGQRTTVFCGICQ 269