Pairwise Alignments

Query, 224 a.a., DNA repair protein RadC from Vibrio cholerae E7946 ATCC 55056

Subject, 231 a.a., putative DNA repair protein (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  125 bits (315), Expect = 5e-34
 Identities = 73/223 (32%), Positives = 122/223 (54%), Gaps = 1/223 (0%)

Query: 1   MSLKQLPTESMPREKLLQRGPQSLSDAELLAIFLRTG-TQGMNVLALADLLLRDFGSLRA 59
           +S+ Q   E  PREK++++G  +LSDAELLAI + +G T+   V  +  LLL    +L +
Sbjct: 7   LSINQWALEDRPREKMMEKGAAALSDAELLAILIGSGNTEESAVELMRRLLLSCDNNLNS 66

Query: 60  LFCASKEQFCRHKGLGEAKFVQLQAVLEMTQRYLAETLKRGDALTSPQQTKLYLSSVLRD 119
           L       + R KG+G AK + + A LE+ +R   + ++    ++  +        V+ D
Sbjct: 67  LAKWEVCDYSRFKGMGPAKSITVMAALELGKRRKLQNIQERPRISCSRDIYDIFQPVMCD 126

Query: 120 RQREAFYILFLDNQHRVIRDEILFEGTIDAASVYPREVVKRALHHNAAAVILAHNHPSGV 179
            ++E F++L L+   R+I    +  G ID      R +++ AL   A  + + HNHPSG 
Sbjct: 127 LEQEEFWVLLLNQATRLIDKVRISTGGIDGTYTDVRTILREALLQRATQIAVVHNHPSGN 186

Query: 180 AEPSQADRRITDRLRDALGLVEIRVLDHFVVGDGEVVSFAERG 222
            +PSQ DR +T+ +R A   + IR++DH +V + +  SFA+ G
Sbjct: 187 IQPSQPDRTLTEHIRRAADTMNIRLIDHVIVCEDKFYSFADEG 229