Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  286 bits (733), Expect = 1e-81
 Identities = 182/551 (33%), Positives = 292/551 (52%), Gaps = 31/551 (5%)

Query: 24  LIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMGVTAVKPLYESDKAG 83
           LI++ ++VM       L  L   L+   +DL  AK ++ Q +++   + V   Y+  +A 
Sbjct: 15  LILVVSIVMLFT----LGALM--LKQIHSDLYQAKVQKTQ-HVVQTASGVLTYYQGLEAA 67

Query: 84  EN------QAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVA 137
                   Q QA   ++ +R++   YF+  D   V  +H   P+LEG+NL  ++D NG A
Sbjct: 68  GTLTRDAAQKQALSAVRGLRYNQTDYFWINDLTPVMIMHPTNPKLEGQNLSAIRDPNGYA 127

Query: 138 VIAGLIDASKT-GDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVA 196
           +   ++  +K+ G G + + W KP   A   K  Y +    W W++G+G+Y+DDV    A
Sbjct: 128 LFNEMVAIAKSKGAGMINYLWPKPGAEAPVGKTSYVQLFEPWGWIIGSGVYVDDVQ---A 184

Query: 197 EFRAQREADLYDQMISAIGLSVVGLVFTIIA---VSVLVSRGIAPLQHVVSSLQAVAAGG 253
           EF++Q            I  SVVGLV T++    ++++V   + PLQ  V+++  +A+G 
Sbjct: 185 EFQSQ-----------VIKASVVGLVITLLMGLLLTLIVRSIVGPLQETVNAMANIASGE 233

Query: 254 GDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHK 313
            DLT  +    QDE+  +A+ FNAF  KL  ++T ++ASA+ +  ++ EL    +QA  +
Sbjct: 234 SDLTRTLDTHGQDEVTQLARHFNAFTAKLRQVVTQLQASASALGQSSSELGNDAAQAQER 293

Query: 314 MDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGEL 373
                 + + V  A+ E++   ++VA N    A  +  A SQ    Q  ++ ++  I  L
Sbjct: 294 SQQQSQQMELVATAINEVTYGVQDVAKNAEHAANEMRDAESQAQQGQVNIDGSLQQIDRL 353

Query: 374 VNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVA 433
              ++Q    +  L+ ++ +I  VL+VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVA
Sbjct: 354 SQTIDQAVEVIRTLASESTQIGSVLEVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVA 413

Query: 434 DEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGIS 493
           DEVR LA RTQ ST EI  M+  L      AV+ +  S    + T  ++     SL  I 
Sbjct: 414 DEVRLLAQRTQKSTAEIQAMIERLQTHSEAAVKVIGDSSRASQLTIEQAGLAGASLNAIG 473

Query: 494 KAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQ 553
           +A+  ++ +    ASA  QQ+ V EDINQN+     + +  + + +Q+   S  L    +
Sbjct: 474 QALRNLNSLNASIASATLQQAHVVEDINQNVTQAAGLSHSTAMAAEQSSQASTRLKALSE 533

Query: 554 QMGTLVGHFKL 564
           Q+  L+  F++
Sbjct: 534 QLNGLLTQFRV 544