Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 559 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N2E2

 Score =  369 bits (946), Expect = e-106
 Identities = 209/557 (37%), Positives = 326/557 (58%), Gaps = 2/557 (0%)

Query: 10  LRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMG 69
           L  + K+L L ++P+++   ++             KE++  R  L+   K  LQ Y+ +G
Sbjct: 3   LSLKAKVLSLAILPVLLSAVIISLTTAFILKEQASKEVQQTRERLLSEAKATLQNYVAVG 62

Query: 70  VTAVKPLYESDKAGENQAQAKQI--LKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNL 127
           +TA+KPLY++   G+N+A+A+ I  L  + +  DGYFF YDS+ +    A  P+  GK+ 
Sbjct: 63  LTAIKPLYDAATPGDNEARAQAIKLLSNISYGKDGYFFGYDSETIRLFKANSPDGVGKSF 122

Query: 128 YGMKDENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIY 187
              +D NGV V   L+  +K G  +L +S   P      PKLGY EYL KWD  +G+ + 
Sbjct: 123 KDNRDPNGVYVNRDLVKVAKDGTHYLEYSSPLPGSQDLVPKLGYTEYLSKWDLAVGSSVN 182

Query: 188 IDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQ 247
           +D ++ QVA   A+    +   ++S +G++ V L+   +   +L +  + PL  +  +L 
Sbjct: 183 LDGIEAQVALVEAKVHDRVQGVILSIVGIAAVVLLVIAVVGLLLANAILRPLHLMKDNLD 242

Query: 248 AVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQT 307
            +AAG GDLT R+ + SQDE+G +A +FN F+DK+H L+  I    + +     ++ +Q 
Sbjct: 243 DIAAGEGDLTRRLTITSQDELGQLAGSFNRFVDKIHGLVRQITDMTSQLTGLVTQVSEQA 302

Query: 308 SQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAI 367
            ++   M+    ETD+V  A+ EMS+ A+EVA +    A A +  + +   A++ V  +I
Sbjct: 303 QRSEQAMERQRHETDQVATAINEMSSAAQEVARSAQGAAVAAQQTDEEGQSAKRVVAGSI 362

Query: 368 DGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGR 427
             I  LVN++  +  ++  L Q  A I  VL VI  IAEQTNLLALNAAIEAARAGE GR
Sbjct: 363 QQIHALVNDIRSSGVSLDSLQQDVASIVSVLGVIRSIAEQTNLLALNAAIEAARAGEAGR 422

Query: 428 GFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKE 487
           GFAVVADEVR+LASRTQ ST+EI  M++ L  G   AV++M  S E G+ T+  + +   
Sbjct: 423 GFAVVADEVRALASRTQQSTQEIQGMIDRLQSGTHAAVEAMRRSSEAGDGTSERANEAGA 482

Query: 488 SLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSAS 547
           SL  +++ +  I+ M  Q ASAAE+Q+AVAE+IN+++  I   V+ +++  +     S S
Sbjct: 483 SLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTSRS 542

Query: 548 LSHSGQQMGTLVGHFKL 564
           L+  GQ++G LVG F++
Sbjct: 543 LADLGQRLGKLVGQFRI 559