Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 544 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2C3

 Score =  254 bits (649), Expect = 6e-72
 Identities = 142/369 (38%), Positives = 219/369 (59%), Gaps = 5/369 (1%)

Query: 200 AQREADLYDQMISAIGLS-----VVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGG 254
           + RE D   +   A+G+      ++GL   ++ ++VL    ++P++ ++  ++ +A GGG
Sbjct: 175 SHREGDAAIENGEAVGVQQGAILLIGLFCCVLVLTVLPLVVLSPMRRLLHRVEQIAEGGG 234

Query: 255 DLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKM 314
           DL  R++V S DE+G +  AFN F+DKL PL+ ++      V++AA+ +    +     +
Sbjct: 235 DLKGRLEVRSADELGQLGGAFNRFLDKLQPLIAEVGRVTGEVDSAARAMADMAATNDRLI 294

Query: 315 DGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELV 374
                  D+V  A T+MSA   EVA N  S + A + A+SQ     + V+  I+ I +L 
Sbjct: 295 SSEHAALDQVSTAATQMSAAVHEVAHNAVSASDAAQQASSQSRDGAEVVSSTIESIRQLA 354

Query: 375 NEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 434
            EV   S  +  L+Q+ + I  VL+VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVAD
Sbjct: 355 QEVESASGTIEALAQETSSIGAVLEVIRGIAEQTNLLALNAAIEAARAGEQGRGFAVVAD 414

Query: 435 EVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISK 494
           EVR+LA+RTQ+STK+I   +  L  GV+KAVQ+M +   +   +   +  + E L+G S 
Sbjct: 415 EVRALAARTQDSTKDIQVRIERLQSGVAKAVQAMQVGSSKARDSVERAAGVDEVLSGTSG 474

Query: 495 AVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQ 554
           ++  I+DM  Q A+A E+QS+V E+I +N+  I+ + NE + +  Q+   S  LS   + 
Sbjct: 475 SIQRINDMAAQIANACEEQSSVTEEIARNISDIRDLSNEAASNSAQSMQASQQLSSLSRN 534

Query: 555 MGTLVGHFK 563
           +  L G F+
Sbjct: 535 LAELTGRFR 543