Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 560 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  366 bits (940), Expect = e-105
 Identities = 212/559 (37%), Positives = 330/559 (59%), Gaps = 5/559 (0%)

Query: 10  LRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMG 69
           L  + K+L L+V+P+++   ++            +KE+E  R  L++  K  LQ+Y+ + 
Sbjct: 3   LSLKAKVLSLSVLPVLLFALVISLTTAFILQEQARKEVEETRQRLMNDAKATLQSYVAVA 62

Query: 70  VTAVKPLYESDKAGENQAQAK--QILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNL 127
           +TA+KPLY++   G+  A+A+  ++L ++ +  DGYFF YDS  V    A  PE  G++ 
Sbjct: 63  MTAIKPLYDAAAPGDEAARAQVVKLLSSISYGKDGYFFGYDSNTVRLFKANSPEGVGQSF 122

Query: 128 YGMKDENGVAVIAGLIDASKTGDGFLYFSWHKP-TINAQAPKLGYAEYLPKWDWVLGTGI 186
              +D NGV V   L+  +K G  +L +S   P       PKLGY EYL KWD  +GT +
Sbjct: 123 KDNRDPNGVYVNRDLVKVAKDGTHYLQYSSPLPGDSKVLVPKLGYTEYLSKWDMAIGTSV 182

Query: 187 YIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGI-APLQHVVSS 245
            +D V+ QVA  + +    +   ++S +G++ V ++  I AV + V+  I  PL  + ++
Sbjct: 183 NLDGVEAQVAVVQTEVRERMEGVLLSIVGVAAV-VLLVIAAVGLFVANTILRPLHLMKAN 241

Query: 246 LQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQ 305
           L  +AAG GDLT R+ + SQDE+G++A +FN F+DK+H L+  I    + +     ++  
Sbjct: 242 LDDIAAGEGDLTRRLAITSQDELGELAGSFNRFVDKIHSLVRQITEMTSQLTGLVNQVSD 301

Query: 306 QTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNL 365
           Q  ++   M+    ETD+V  A+ EMSA A+EVA +    A A +  + +   A++ V  
Sbjct: 302 QAQRSDQAMERQRHETDQVATAINEMSAAAQEVAKSAQGAAVAAQQTDEEGQAAKRVVAG 361

Query: 366 AIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQ 425
           +I  I  LV ++  +  ++  L Q  + I  VL VI  IA+QTNLLALNAAIEAARAGE 
Sbjct: 362 SISQIHALVKDIRSSGVSLDSLQQDVSSIVSVLGVIRSIADQTNLLALNAAIEAARAGEA 421

Query: 426 GRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQI 485
           GRGFAVVADEVR+LASRTQ ST+EI  M++ L  G   AV +M  S E G+ T+ ++ Q 
Sbjct: 422 GRGFAVVADEVRALASRTQQSTQEIQGMIDRLQAGTQSAVDAMRRSSEAGDGTSAQANQA 481

Query: 486 KESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVS 545
             SL  +++ +  I+ M  Q ASAAE+Q+AVAE+IN+++  I   V+ +++  +     S
Sbjct: 482 GASLDTMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQLGAQTS 541

Query: 546 ASLSHSGQQMGTLVGHFKL 564
            SL+  GQ++G LVG F++
Sbjct: 542 RSLADLGQRLGKLVGQFRI 560