Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 715 a.a., chemotaxis protein from Pseudomonas fluorescens FW300-N2E3

 Score =  228 bits (581), Expect = 6e-64
 Identities = 135/351 (38%), Positives = 196/351 (55%)

Query: 214 IGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAK 273
           + L V+  V  ++ V ++      P+  V   L+ +A+G GDLT R+  + QDE+G +A 
Sbjct: 365 LSLGVLAAVIGLLLVWLMARSVTRPILGVARMLEDIASGEGDLTRRLAYDKQDELGQLAG 424

Query: 274 AFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSA 333
            FN F+DKL P++  ++ S     + A +     +Q S  M+    + D+V  A  EMSA
Sbjct: 425 WFNRFLDKLQPIIAQVKRSVQDARSTADQSSAIATQTSAGMEQQYRQVDQVATASHEMSA 484

Query: 334 TAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAK 393
           TA++VA +    AQA   A+         ++     I  L  +++     V  L+  + K
Sbjct: 485 TAQDVARSAAQAAQAARDADQATRQGLTVIDRTTASIDSLAADMSTAMTQVEGLAANSEK 544

Query: 394 ITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEM 453
           I  VL+VI  IAEQTNLLALNAAIEAARAG+ GRGFAVVADEVR+LA RTQ S +E  ++
Sbjct: 545 IGSVLEVIRAIAEQTNLLALNAAIEAARAGDAGRGFAVVADEVRNLARRTQESVEETRQV 604

Query: 454 LNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQ 513
           +  L  G    V SMN S  + + +     Q   +L  I  AV++I DM +Q ASAAE+Q
Sbjct: 605 IEQLQSGTQDVVGSMNNSHRQAQGSVEHVSQAVTALRQIGDAVTVITDMNLQIASAAEEQ 664

Query: 514 SAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           SAVAE+IN N+  I+ +   LS    ++  VS SL+    Q   L+  F++
Sbjct: 665 SAVAEEINSNVATIRDVTESLSGQANESARVSQSLNSLANQQQGLMDQFRV 715