Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 586 a.a., Methyl-accepting chemotaxis protein I (serine chemoreceptor protein) from Pseudomonas fluorescens FW300-N1B4

 Score =  375 bits (963), Expect = e-108
 Identities = 214/564 (37%), Positives = 337/564 (59%), Gaps = 5/564 (0%)

Query: 4   NLMLSSLRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQ 63
           N+M  SL++  K+L L V+P+++   ++            +KE+E  R  L+   K  LQ
Sbjct: 25  NVMRMSLKA--KVLSLAVLPVLLFALVISLTTLFILQEQARKEVEQTRQRLLSDAKATLQ 82

Query: 64  AYLMMGVTAVKPLYESDKAGENQAQAK--QILKAMRFDSDGYFFAYDSQGVNTLHAIKPE 121
           +Y+ + +T +KPLY++   G++ A+A+  ++L ++ +  DGYFF YDS  V    A  PE
Sbjct: 83  SYVAVAMTTIKPLYDAAAPGDDAARAQVVKLLSSITYGKDGYFFGYDSNTVRLFKANSPE 142

Query: 122 LEGKNLYGMKDENGVAVIAGLIDASKTGDGFLYFSWHKP-TINAQAPKLGYAEYLPKWDW 180
             G++    +D NGV V   L+  +K G  +L +S   P       PKLGY EYLPKWD 
Sbjct: 143 GVGQSFKDNRDPNGVYVNRDLVKVAKDGTHYLQYSSTLPGNTQVLVPKLGYTEYLPKWDM 202

Query: 181 VLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQ 240
            +GT + +D ++ QVA   A+ +  +   ++S +G++VV L+    A  +L +  + PL 
Sbjct: 203 AVGTSVNLDGIEAQVAVVEAKVQERMQGVVLSIVGIAVVVLLMIAAAGMLLANTILRPLN 262

Query: 241 HVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAA 300
            + ++L  +AAG GDLT R+ + SQDE+G++A +FN F+DK+H L+  I    + +    
Sbjct: 263 LMKANLDDIAAGEGDLTRRLTITSQDELGELAGSFNRFVDKIHGLVRQITEMTSQLTGLV 322

Query: 301 QELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQ 360
            ++  Q  ++   M+    ETD+V  A+ EMSA A+EVA +  + A A +  + +   A+
Sbjct: 323 NQVSDQAQRSDQAMERQRHETDQVATAINEMSAAAQEVAKSAQNAAVAAQQTDEEGQAAK 382

Query: 361 KEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAA 420
           + V  +I  I  LVN++  +  ++  L +  + I  VL VI  IAEQTNLLALNAAIEAA
Sbjct: 383 RVVAGSIVKIHALVNDIRSSGVSLDSLQKDVSSIVSVLGVIRSIAEQTNLLALNAAIEAA 442

Query: 421 RAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTAL 480
           RAGE GRGFAVVADEVR+LASRTQ ST+EI  M++ L  G   AV++M  S E G+ T+ 
Sbjct: 443 RAGEAGRGFAVVADEVRALASRTQISTQEIQGMIDRLQAGTQSAVEAMRRSSEAGDGTSA 502

Query: 481 ESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQ 540
           ++ +   SL  +++ +  I+ M  Q ASAAE+Q+AVAE+IN+++  I   V+ +++  + 
Sbjct: 503 QANEAGASLDAMAQLIGTINSMNAQIASAAEEQTAVAEEINRSVHQIAVAVDSVADETQL 562

Query: 541 TESVSASLSHSGQQMGTLVGHFKL 564
               S SL+  GQ++G LVG F++
Sbjct: 563 GAQTSRSLADLGQRLGKLVGQFRI 586