Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  210 bits (534), Expect = 2e-58
 Identities = 140/476 (29%), Positives = 241/476 (50%), Gaps = 29/476 (6%)

Query: 91  QILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAGLIDASKTGD 150
           +I+ A+ F+  G+ F     G   +H                 +G  V+  L +      
Sbjct: 181 EIINALDFNGMGHAFLVSGDGKILVHP----------------DGSKVMKSLGELFPGHT 224

Query: 151 GFLYFSWHKPTINAQAPKLGYAEY--LPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYD 208
             L  ++ +  ++ Q   L ++    LP   W +G  +        +A FR         
Sbjct: 225 PSLDANYSEAELDGQTRILSFSRVQGLPSVSWYVGISLDKAKAYAALASFRTSA------ 278

Query: 209 QMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEI 268
            +++A  L+ VG++  ++ + + V   + PL  +  ++  +A G GDLT R+ V+S+DE 
Sbjct: 279 -VVAA--LTAVGVILLLLGMLMRVL--MRPLTDMGRAMANIAEGEGDLTRRLAVQSKDEF 333

Query: 269 GDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAV 328
           G++A AFN F++++H  + ++ ++   V   A  +   ++ +    D     T+ V AA+
Sbjct: 334 GELASAFNRFVERIHTSIREVSSATQQVNEVAARVLAASNSSMANSDEQASRTNSVAAAI 393

Query: 329 TEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLS 388
            E+ A A+E+A N    +Q    A  Q    ++ V   I  + EL  +++ + A +  L+
Sbjct: 394 NELGAAAQEIARNAADASQQASGARHQAEDGRQVVEQNIAAMRELSAKISASCAQIEALN 453

Query: 389 QQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTK 448
            +   I Q+L+VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+S +
Sbjct: 454 AKTVDIGQILEVIKGISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQSSAQ 513

Query: 449 EIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTAS 508
           EI +M+  L  G   +VQ+M  SQ + E +   + +  E L  +++ +  I  M    A+
Sbjct: 514 EIQQMIEQLQVGAGASVQTMTESQRQSESSVSIADRAGERLGEVTQRIGEIDGMNQSVAT 573

Query: 509 AAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           A E+Q+AV E +N ++  I  +  +  E+ + T      L    +++  LV  F++
Sbjct: 574 ATEEQTAVIESLNMDITEINTLNQQGVENLQSTLRACGDLDQQARRLKQLVDSFRI 629