Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  226 bits (577), Expect = 1e-63
 Identities = 138/349 (39%), Positives = 200/349 (57%), Gaps = 4/349 (1%)

Query: 216 LSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAF 275
           L V+G+V   + V  ++ R I  ++H ++++    A   DL+  + + ++DEIG +  AF
Sbjct: 195 LLVIGVVVMCMTVRHVIIRRINAMRHTMNAM----AEDEDLSRSVAIGAKDEIGAMGDAF 250

Query: 276 NAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATA 335
           N  + K    +  +    + +   ++ +     +    ++    ETD V +A+ EMSAT 
Sbjct: 251 NRMIGKFRHSLEAVAGVTHQLTDVSERVSHVAEKTLAAVNEQRSETDMVASAMNEMSATV 310

Query: 336 REVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKIT 395
           +EVA N   TA A   A+++     K    A+DGI  L+ E+ + +  +  +   +A I 
Sbjct: 311 QEVARNANQTATASAGADTESKAGVKVATEALDGIEVLIAEIEKAAQVIQRVESDSASID 370

Query: 396 QVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLN 455
            VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LASRTQ ST+EI  M+ 
Sbjct: 371 MVLGVINGIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLASRTQKSTEEIQAMIE 430

Query: 456 ALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSA 515
            L  GV  AVQ+M  +Q R    +    +  +SL  I+  V  I++M  Q A+AAEQQSA
Sbjct: 431 QLQSGVRNAVQAMKEAQLRARSGSQCVEKAAQSLGLIATEVGTINEMNTQIATAAEQQSA 490

Query: 516 VAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           VAE+IN+N+  I +I +  S    QT  +S  L     ++  LVG FKL
Sbjct: 491 VAEEINRNISTISRIADTTSTDATQTSEISDELVRLATELNRLVGQFKL 539