Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 584 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  353 bits (906), Expect = e-101
 Identities = 210/564 (37%), Positives = 325/564 (57%), Gaps = 4/564 (0%)

Query: 4   NLMLSSLRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQ 63
           N MLS+LR R KLLLL + P++++  L+  +      S  +++  + R  LI  ++ EL+
Sbjct: 22  NHMLSNLRLRMKLLLLALGPILLLAILLSGIAVYELQSLAEQQEAHTRDSLIQDRRAELK 81

Query: 64  AYLMMGVTAVKPLYESDKAGENQA--QAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPE 121
            Y+ +   A+ P+YE    G+ QA  QA  IL+ + +  DGYF+ YD+Q V  L     +
Sbjct: 82  HYVELARNAIGPIYERSAEGDMQARDQAVAILERLSYGKDGYFWGYDTQAVRILQGNTKD 141

Query: 122 LEGKNLYGMKDENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWV 181
             G++ Y  +D NGV  I  L+ A + G  ++ +S+     +   PK+GYAE+LPKW  V
Sbjct: 142 KIGQSFYDYRDPNGVYAIRELVRAGQDGSRYVDYSFVLGNSSELVPKVGYAEFLPKWKMV 201

Query: 182 LGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGI-APLQ 240
            GT + +D V+  V   RA+ +  + D +++ + +S   L+  +  +++ +S  + +PL 
Sbjct: 202 FGTSLNLDGVERDVQAARAEFQKRI-DGLVTIMLVSAFALLVLMALLAIFMSNALLSPLL 260

Query: 241 HVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAA 300
            +  +L  +A G GDLT R+ + SQDE+G++A +FN F++K+H L+  +  +   +    
Sbjct: 261 LIKRNLDDMAQGDGDLTQRLPITSQDELGELAMSFNRFVEKIHSLVQQVAGTTTQLSGLV 320

Query: 301 QELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQ 360
             +  Q  ++   M     ETD+V  A+ EMSA A EVA +    A+A    + Q   A+
Sbjct: 321 GAVASQAQRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAK 380

Query: 361 KEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAA 420
           + V+ +I  I ELV E+  +  ++  L Q    I  VL VI  IAEQTNLLALNAAIEAA
Sbjct: 381 QVVDQSIRQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAA 440

Query: 421 RAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTAL 480
           RAGE GRGFAVVADEVR+LASRTQ ST EI  M++ L    S  V +M  + E+GE T  
Sbjct: 441 RAGEAGRGFAVVADEVRALASRTQQSTGEIQGMIDRLQSATSNTVSTMLRAGEKGESTRD 500

Query: 481 ESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQ 540
           ++ Q  ESL  IS  +  I+ M  Q A+AAE+Q+AVAE+IN+++  I   V+ ++    Q
Sbjct: 501 QANQAGESLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQ 560

Query: 541 TESVSASLSHSGQQMGTLVGHFKL 564
               S  L+   +++  LVG F++
Sbjct: 561 GAQTSRELNGLAERLQKLVGQFRI 584