Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 561 a.a., Methyl-accepting chemotaxis protein from Pseudomonas stutzeri RCH2

 Score =  353 bits (906), Expect = e-101
 Identities = 213/562 (37%), Positives = 319/562 (56%), Gaps = 4/562 (0%)

Query: 6   MLSSLRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAY 65
           MLSSLR R KLLLL + P++++  ++  V+         ++    R  LI  ++ EL+ Y
Sbjct: 1   MLSSLRLRAKLLLLALGPILLLAVVLSGVSVVQLKDLADQQEAQTRASLIRDRRAELKHY 60

Query: 66  LMMGVTAVKPLYESDKAGENQA--QAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELE 123
           + +   A+ P+YE    G+ QA  QA  I + + + S+GYF+ YD Q          E  
Sbjct: 61  VELAKNAIGPIYERSAEGDMQARSQAVAIFERLSYGSEGYFWGYDGQSRRVFQGATRERI 120

Query: 124 GKNLYGMKDENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLG 183
           G++    +D NGV  I  L+ A +    ++ +S+  P  NA  PK+GYAEYLPKW+ V G
Sbjct: 121 GESFADYRDPNGVFAIRELVKAGQDSSHYVDYSFAVPGSNALVPKVGYAEYLPKWNLVFG 180

Query: 184 TGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGI-APLQHV 242
           T + +DDV+  V E RA  +A +    +  +G S + L+  +  ++VL+S  I  PL  +
Sbjct: 181 TSLNLDDVERDVVEARAVFQARIDSLTLIMLG-SALLLLILMAGLAVLMSNAILRPLLQI 239

Query: 243 VSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQE 302
             +L  +A G GDLT R+ + S+DE+G+++ +FN F++K+H L+  +  +   +      
Sbjct: 240 KQNLDDMAQGDGDLTHRLPITSRDELGELSTSFNRFVEKIHALVRQVAGTTTQLSGLVGA 299

Query: 303 LDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKE 362
           +  Q  ++   M     ETD+V  A+ EMSA A EVA +    A+A    + Q   A++ 
Sbjct: 300 VASQAQRSEQAMADQRSETDQVATAINEMSAAAHEVAMSAQRAAEAARETDQQGVAAKQV 359

Query: 363 VNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARA 422
           V+ +I  I ELV E+  +  ++  L Q    I  VL VI  IAEQTNLLALNAAIEAARA
Sbjct: 360 VDQSIRQIHELVGELRGSGESLEGLQQDVKGIVGVLDVIRAIAEQTNLLALNAAIEAARA 419

Query: 423 GEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALES 482
           GE GRGFAVVADEVR+LASRTQ ST EI  M++ L    S  V +M  + E+GE T   +
Sbjct: 420 GEAGRGFAVVADEVRALASRTQQSTGEIQGMIDRLQNATSHTVGTMLRAGEKGESTRNHA 479

Query: 483 VQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTE 542
            Q  ESL  IS  +  I+ M  Q A+AAE+Q+AVAE+IN+++  I   V+ ++    Q  
Sbjct: 480 NQAGESLDAISALIGTINSMNAQIAAAAEEQTAVAEEINRSVHHIADAVDGVASDAAQGA 539

Query: 543 SVSASLSHSGQQMGTLVGHFKL 564
             +  L+   +Q+  LVG F++
Sbjct: 540 QTARELNGLAEQLQRLVGQFRI 561