Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  221 bits (564), Expect = 5e-62
 Identities = 147/474 (31%), Positives = 232/474 (48%), Gaps = 25/474 (5%)

Query: 91  QILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAGLIDASKTGD 150
           +++ ++R   DGY F  D+ G   +H     L  K L  +   N   +   L ++   G 
Sbjct: 181 KMISSLRMHGDGYAFLVDANGRILVHP-DTSLVMKTLAEVYPANTPRLSQDLSESEYAG- 238

Query: 151 GFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQM 210
                         Q     + + LP  +W +G  +  D     + EFR           
Sbjct: 239 ------------KTQILTFAHVDGLPSVNWYVGVAMDKDIAYAALGEFRN---------- 276

Query: 211 ISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGD 270
            SAI  +V+ +V  I+ + +L+S  + PL  +  ++  +AAG GDLT R+ +ESQDE G 
Sbjct: 277 -SAIVATVIAVVLIILLLGMLLSVLLRPLNLMGRAMHDIAAGEGDLTKRLVIESQDEFGH 335

Query: 271 VAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTE 330
           +   FN F++++H  M ++ +S   +   A  +   ++ +    D     T+ V AA+ E
Sbjct: 336 LGNGFNLFVERIHDSMREVASSTVQLNEVALRVLNASNSSMLNSDQQSHRTNSVAAAINE 395

Query: 331 MSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQ 390
           + A  +E+A N    +     A +  +  Q  V   I+ +  L   ++  S  +  L+ +
Sbjct: 396 LGAATQEIAQNAARASGHSSDARTLASDGQDVVGQNIEAMSRLSKRISSASGQIETLNTK 455

Query: 391 AAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEI 450
            A I Q+L VI  I++QTNLLALNAAIEAARAGE GRGFAVVADEVRSLA RTQ S  ++
Sbjct: 456 TANIGQILDVITGISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAHRTQESASQV 515

Query: 451 GEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAA 510
            EM+  L  G  +AV  MN SQ    +T   + +   SL  +++ +  I  M    A+A 
Sbjct: 516 QEMIEQLQSGAREAVSIMNDSQRESVETVGIANKAVASLEHVTERIGEIDGMNQSVAAAT 575

Query: 511 EQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           E+Q+AV E IN ++  I  +  +  E+   T      L     ++  LVG F++
Sbjct: 576 EEQTAVVEAINVDITEINTLNQQGVENLNATLRACTDLEQQSTRLTQLVGSFRI 629