Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (557), Expect = 3e-61
 Identities = 138/379 (36%), Positives = 212/379 (55%), Gaps = 8/379 (2%)

Query: 187 YIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIA-PLQHVVSS 245
           Y+  VD +     AQ     YD+    + + VV      I +++ ++R I  PLQ  V++
Sbjct: 170 YLTQVDAEGKSAGAQ-----YDKSRDIVIIFVVIAALCTIGLALWLTRSIVGPLQRAVTA 224

Query: 246 LQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQ 305
            + VA   GDLT  I+V+ +DE+  + +A       L   M  I +SA  + +AA EL+ 
Sbjct: 225 AEQVA--NGDLTHTIEVDGEDEVTRLLRALAMMQVNLREAMRHIGSSATQLASAATELNS 282

Query: 306 QTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNL 365
            T  +   ++    E D+   A+ EM++   EVA N  ST+ A   +++     Q  V  
Sbjct: 283 VTEDSYRGLNQQNAEIDQAATAINEMTSAVEEVARNAVSTSDASNQSSTSALAGQTRVIE 342

Query: 366 AIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQ 425
            +  I  L + V  TS  V +L+ Q+  I +VL VI  IAEQTNLLALNAAIEAARAGE 
Sbjct: 343 TVQSIQTLTDNVQATSTLVQNLANQSQDIGKVLDVIRSIAEQTNLLALNAAIEAARAGES 402

Query: 426 GRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQI 485
           GRGFAVVADEVR+LA RTQ ST EI  M++A+  G ++A+ SMN S+ R + T   +   
Sbjct: 403 GRGFAVVADEVRALAHRTQQSTLEIDSMVSAMRSGSAQALDSMNTSRARADSTLALAKGA 462

Query: 486 KESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVS 545
            ESL+ I+ +++ I +  +  ASAAE+Q+ V+ ++++N+V I+ +  + ++   Q  + S
Sbjct: 463 GESLSEITSSINQISERNLVIASAAEEQAQVSREVDRNIVNIRDLSMQSTQGANQISASS 522

Query: 546 ASLSHSGQQMGTLVGHFKL 564
             LS     +  +V  FK+
Sbjct: 523 HELSRLAADLNQVVSRFKV 541