Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 642 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  217 bits (553), Expect = 1e-60
 Identities = 134/365 (36%), Positives = 206/365 (56%), Gaps = 4/365 (1%)

Query: 200 AQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTAR 259
           A +E D    +   + ++V+ L+  I A  ++  +   PL   V + + +A   GDLT  
Sbjct: 282 ANKEKD--SAVTQLLTVAVIVLLLGIFAAILITRQITRPLDSTVIAARRIA--DGDLTND 337

Query: 260 IKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCL 319
           +    QDE+G +          L  L+  I      +  AA+EL   + Q S  +    L
Sbjct: 338 LSTTRQDELGLLQNTMQHMTVSLRTLIGGISNGVTQIATAAEELSAVSEQTSAGVTQQKL 397

Query: 320 ETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQ 379
           E D+V  A+ +M++T +EVA NT   +QA   A+ + A     V  A   I +L  EV Q
Sbjct: 398 EVDQVATAMNQMASTVQEVAQNTEDASQAARQASDRAAHGSSVVQHATREISQLAGEVGQ 457

Query: 380 TSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 439
              A+  L Q + KI  V+ VI  +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL
Sbjct: 458 LGEAMQRLIQDSDKIGGVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSL 517

Query: 440 ASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLI 499
           A RTQ+ST EI  ++ +L  G   A + MN S++R E T   + Q +ESL  I+ ++  I
Sbjct: 518 AQRTQSSTTEIEALIKSLQDGTGAASELMNASRQRTEGTVALARQAEESLLEITHSIVTI 577

Query: 500 HDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLV 559
             M  Q ++AAE+QSAV ++IN+++++++ I ++ + + +Q+ + +  L+  G  +  +V
Sbjct: 578 EQMSQQISAAAEEQSAVTDEINRSVISVRDIADQSATATEQSAASTVELARLGSNLQDMV 637

Query: 560 GHFKL 564
             F++
Sbjct: 638 ARFRI 642