Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 629 a.a., Histidine kinase, HAMP region:Cache:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  226 bits (575), Expect = 3e-63
 Identities = 147/474 (31%), Positives = 246/474 (51%), Gaps = 25/474 (5%)

Query: 91  QILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAGLIDASKTGD 150
           +I+ ++ FD  GY F   + G   +H    +L  KN+      N   +  G+ +      
Sbjct: 181 KIINSLNFDGHGYAFLVSADGKILVHP-DSKLVLKNISEAYPTNTPKITTGVTEID---- 235

Query: 151 GFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQM 210
                S   P I +  P  G +      +W +   +  D     +AEFRA          
Sbjct: 236 -----SGKNPEIISFTPVQGVSTA----NWYVALVLEQDSAYAMLAEFRA---------- 276

Query: 211 ISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGD 270
            SAI   VV +V  I+ + +L+   + PL  +  +++ +A G GDLT R+ + SQDE G+
Sbjct: 277 -SAITAMVVVVVVIILLLGLLIRVLMQPLHQMGRAMRDIADGEGDLTKRLAITSQDEFGE 335

Query: 271 VAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTE 330
           +A++FN F++++H  + ++ ++A  +   A  + + ++ +    D     T+ V AA+ E
Sbjct: 336 LAESFNRFVERIHTSIREVASTAAQLGEVATRVVKVSNASMGNSDQQANRTESVAAAINE 395

Query: 331 MSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQ 390
           + A A+E+A N   T+Q    A+   +  Q  V   I  + EL  +++++   +  L+ +
Sbjct: 396 LGAAAQEIAQNAARTSQQSSDASGLASDGQNVVQQTIKAMNELSGKISESCVNIESLNGK 455

Query: 391 AAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEI 450
            A I Q+L+VI  I++QTNLLALNAAIEAARAGE GRGFAVVADEVR+LA RTQ+S +++
Sbjct: 456 TANIGQILEVITSISQQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLAHRTQDSAQQV 515

Query: 451 GEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAA 510
             M+  L  G   AV +M  SQ + E +   +    E L  +++ +  I+ M    A+A 
Sbjct: 516 QTMIEELQVGARDAVTNMTESQRQSEDSVGIANLAGERLGSVTRRIEEINGMNQSVAAAT 575

Query: 511 EQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           E+Q++V E IN ++  I  +     ++ +QT     SL     ++  LVG F++
Sbjct: 576 EEQTSVVESINVDITHINTLNQLGVDNLRQTLEACNSLEEQAARLQQLVGSFRI 629