Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 681 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  219 bits (559), Expect = 2e-61
 Identities = 136/360 (37%), Positives = 209/360 (58%), Gaps = 5/360 (1%)

Query: 208 DQMISAIGLSVVGLVFTIIAV--SVLVSRGIA-PLQHVVSSLQAVAAGGGDLTARIKVES 264
           +Q  + + L  V LV  ++ +  + L++R I  PL   V + + +A   GDLT       
Sbjct: 324 EQQTAVVQLLSVALVVLLVGIFAAFLITRQITVPLNSTVIAARRIA--DGDLTHDSSTTR 381

Query: 265 QDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKV 324
           QDE+G +          L  L+  I      +  AA++L   + Q S  +     E D+V
Sbjct: 382 QDELGLLQNTMQHMTVSLRGLIGGIGNGVTQIATAAEQLSAVSEQTSAGVTLQKNEVDQV 441

Query: 325 VAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAV 384
             A+ EM++T +EVA NT   +QA + A+ + A     V  A   IG+L  EV Q   A+
Sbjct: 442 ATAMNEMASTVQEVARNTEDASQAAKQASERAAHGSSVVQHATREIGQLAGEVQQLGEAM 501

Query: 385 GDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQ 444
             L++ + KI  V+ VI  +AEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA RTQ
Sbjct: 502 QRLTEDSGKIGSVIDVIKAVAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAQRTQ 561

Query: 445 NSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGI 504
           NST EI  ++ AL +G   A   M+ S +R E T + + Q +++L  I++++  I  M  
Sbjct: 562 NSTTEIEALIQALQKGTGAASGLMDASLQRTEGTVVLARQAEQALVEINQSIGTIEQMSQ 621

Query: 505 QTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           Q ++AAEQQSAV E+IN+++++++ I ++ + + +Q+ + +  L+  G  + ++V  FK+
Sbjct: 622 QISAAAEQQSAVTEEINRSVLSVRDIADQSASATEQSAASTVELARLGSDLQSMVARFKI 681