Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 640 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  223 bits (569), Expect = 1e-62
 Identities = 139/364 (38%), Positives = 211/364 (57%), Gaps = 2/364 (0%)

Query: 201 QREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARI 260
           +R+ +      + I  +++ ++  IIA  ++  +   PL+  ++ +  +A+G  DLT  +
Sbjct: 279 RRDQESAQARTTQITCTLLAIILGIIAAVIITRQITRPLRETLAVVDRIASG--DLTQTL 336

Query: 261 KVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLE 320
            V   DE+G + +        L  L+  IR S   + +AA+EL   T Q S  ++   +E
Sbjct: 337 AVTRSDELGVLQQGIQRMGTTLRELIGGIRDSVVQIASAAEELSAVTEQTSAGVNSQKVE 396

Query: 321 TDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQT 380
           TD+V  A+ EMSAT  EVA N    +QA  +A+ +     K V  AI  I  L NEV ++
Sbjct: 397 TDQVATAMHEMSATVAEVARNAEQASQAASNADREARDGDKVVGEAIAQIERLANEVGRS 456

Query: 381 SAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLA 440
             A+ +L Q++ KI +V+ VI  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVR LA
Sbjct: 457 VDAMTELEQESDKIGKVMDVIKAVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRGLA 516

Query: 441 SRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIH 500
            RTQ ST EI  ++ AL  G  +    M  S+E    +   S Q   SL  I++ VS I 
Sbjct: 517 QRTQQSTVEIETLVAALQSGTRQVSSIMLNSRELTVSSVTLSRQAGTSLGSITQTVSSIQ 576

Query: 501 DMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVG 560
            M  Q A+AAE+QSAVAE+I++++V ++ +  + + + ++T + S  L+  G Q+ T+V 
Sbjct: 577 AMNQQIAAAAEEQSAVAEEISRSIVNVRDVSEQTASASEETAASSVELARLGGQLQTMVS 636

Query: 561 HFKL 564
            F++
Sbjct: 637 RFRI 640