Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., Histidine kinase, HAMP region:Bacterial chemotaxis sensory transducer from Pseudomonas syringae pv. syringae B728a

 Score =  233 bits (595), Expect = 1e-65
 Identities = 142/361 (39%), Positives = 210/361 (58%), Gaps = 2/361 (0%)

Query: 202 READLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIK 261
           R+AD    +   I  + + +V  I+A  V+  +   PLQ  +  ++ VA+G  DL+  + 
Sbjct: 278 RDADSAKSVQMIIAATALAMVLGILAAWVITRQITTPLQETLEVVERVASG--DLSRNLN 335

Query: 262 VESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLET 321
           V+ +DE+G +          L  L+  IR     + +AA+EL   T Q S  ++   +ET
Sbjct: 336 VDRKDELGKLQATIQRMTVSLRELVGGIRDGVTQIASAAEELSAVTEQTSAGVNSQKVET 395

Query: 322 DKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTS 381
           D+V  A+ EM+AT +EVA N    ++A  +A+ Q    ++ VN AI  I  L + V  +S
Sbjct: 396 DQVATAMHEMTATVQEVARNAEEASEAAVAADRQARDGERVVNEAIAQIERLASAVGNSS 455

Query: 382 AAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAS 441
            A+G L Q++ KI  VL VI  +AEQTNLLALNAAIEAARAGE GRGFAVVADEVRSLA 
Sbjct: 456 EAMGALKQESDKIGSVLDVIKSVAEQTNLLALNAAIEAARAGEAGRGFAVVADEVRSLAQ 515

Query: 442 RTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHD 501
           RTQ ST+EI  ++  L  G  +A   M+ S+E    +   + +   SLA I+K VS I  
Sbjct: 516 RTQKSTEEIEALIARLQSGTQQATTVMDSSRELSTSSVELTRRAGGSLANITKTVSSIQA 575

Query: 502 MGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGH 561
           M  Q A+AAE+QSA AE+IN++++ ++ +  + S + ++T + S  L+  G  +  LV  
Sbjct: 576 MNQQIAAAAEEQSATAEEINRSIINVRDVSEQTSAASEETAASSVELARLGNHLQVLVSR 635

Query: 562 F 562
           F
Sbjct: 636 F 636