Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 636 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  229 bits (585), Expect = 2e-64
 Identities = 149/475 (31%), Positives = 241/475 (50%), Gaps = 26/475 (5%)

Query: 91  QILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAGLIDASKTGD 150
           Q L + + +  G+ +  D++G   LH+   ++    L  +  ++G      L+  +    
Sbjct: 187 QRLTSFKLEESGFVYLVDAKGEVQLHSDPGKIRKATLNSLYGKSG-----SLLSRAD--- 238

Query: 151 GFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQM 210
               F++ +  ++ Q P +  + YLP  DW L            VA+        L D+ 
Sbjct: 239 ----FNYMEVEVDGQ-PMMVASSYLPSIDWYL------------VAQVPEAEVFALLDEA 281

Query: 211 ISAIGLSVVGLVFTIIAVSVLVSRGIA-PLQHVVSSLQAVAAGGGDLTARIKVESQDEIG 269
              I  S + +    + +S  V+  ++ P+  V    + +  G GDL  R+ V+ +DE+ 
Sbjct: 282 ALKILFSTLLIALAFVVLSGFVASSVSKPIAAVARMFRDIGEGEGDLRQRLPVQGEDELA 341

Query: 270 DVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVT 329
            +A  FN+F+ K+   + ++  ++  +  +A ++ +Q  Q           T +VV A+ 
Sbjct: 342 QLASGFNSFISKIQDSVIEVAQTSEQLGKSAIDVSRQAQQTLEDSQDQKDRTMQVVTAIN 401

Query: 330 EMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQ 389
           EM AT  E+A+N    A+A + A+      QK V  A D I +L  +V+Q    +  L+ 
Sbjct: 402 EMGATVNEIAANAAQAAEAAKDADRASGSGQKVVTQARDTINQLSKDVSQVGEVIESLAT 461

Query: 390 QAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKE 449
               I  +L VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LASRT  ST E
Sbjct: 462 HTKSIGSILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAASTDE 521

Query: 450 IGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASA 509
           +  M++ L    ++AV +M+ S+ R ++      +   +L+GIS  + LI DM IQ A+A
Sbjct: 522 VQVMIDKLQSESARAVNAMSQSRSRSQEGVSAVDEASNTLSGISDQIGLISDMNIQVAAA 581

Query: 510 AEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
            E+QS V EDIN+N+  I  I    + + +     S  L+    ++  LV  FK+
Sbjct: 582 TEEQSTVVEDINRNVTEINDITQRTAATAQAAARASKDLNALATRLDQLVARFKV 636