Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 621 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  218 bits (556), Expect = 4e-61
 Identities = 135/383 (35%), Positives = 206/383 (53%), Gaps = 9/383 (2%)

Query: 188 IDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSV------LVSRGIAPLQH 241
           ID  +    E R     +++D+   ++ ++    +F +IAV V      ++   I P+ +
Sbjct: 241 IDQSEQATQELRELALHEIHDEEGDSVAMATT--LFAVIAVLVAIVTFMIIRAIITPINN 298

Query: 242 VVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQ 301
           +   +  V     +LT R   +  DEI ++ + FN  ++    L+  +  + N +  + Q
Sbjct: 299 INQVISHVGKDK-NLTLRCDTQGGDEIAEIGQHFNEMVESFRALIQQVNDAVNVMNESCQ 357

Query: 302 ELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQK 361
           EL    +QAS  +     ETD V  A+TEM AT  E+A NT   A+     ++   V Q+
Sbjct: 358 ELSANATQASDGVLRQLNETDMVATAITEMGATIDEIAKNTELAAERANHTHTNAQVGQQ 417

Query: 362 EVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAAR 421
            V   I+ I  L  ++N +++ V +L + +  I  VL VI  IAEQTNLLALNAAIEAAR
Sbjct: 418 SVEQTIEKIQSLAQQLNNSASVVAELERDSGTIGSVLDVIRGIAEQTNLLALNAAIEAAR 477

Query: 422 AGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALE 481
           AGEQGRGFAVVADEVRSLA RTQ ST+EI  ++  L       VQ M  SQ +G ++A +
Sbjct: 478 AGEQGRGFAVVADEVRSLAMRTQESTEEIAGIIQTLQSRTRSIVQLMEASQRQGGESAEQ 537

Query: 482 SVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQT 541
           +      LA I++ V+ I DM  Q A+A E+QS+VA ++N+N+V I+ I  E S +    
Sbjct: 538 AASAGTMLAQINQDVTNIMDMSTQIAAAIEEQSSVAAEVNKNVVVIRDIAEESSHAAMAN 597

Query: 542 ESVSASLSHSGQQMGTLVGHFKL 564
              S  +    + +   V  F++
Sbjct: 598 AKASDDVRERAEYLQRAVSQFRV 620