Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  213 bits (542), Expect = 2e-59
 Identities = 133/352 (37%), Positives = 200/352 (56%), Gaps = 3/352 (0%)

Query: 214 IGLSVVGLVFTIIAVSVLVSRGI-APLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVA 272
           IGL+V  ++ T     V V+RG+  P+  +   L+ +     D+T    V   DE+G +A
Sbjct: 192 IGLAVFAVLITSF-FGVWVNRGVMTPVTEIRQKLRQIREKS-DMTVSFTVFRDDELGHIA 249

Query: 273 KAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMS 332
           K  N  ++ L  ++ +I  +A+T+  +A EL++ T QA+ +M     ET++   A+ EM+
Sbjct: 250 KDLNGVVNHLKGILKNIAEAASTLGDSADELNEFTRQANDRMFKQQSETEQTATAMNEMT 309

Query: 333 ATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAA 392
           A   EVA ++ S A++  +A+   A     V  +I  +  L +++  T+A +G+L+ ++ 
Sbjct: 310 AAVAEVAQSSNSAAESARNADESAARGNSIVQQSISSMSVLASQIQGTAAVIGELATESQ 369

Query: 393 KITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGE 452
            I +VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADEVR+LA RT  ST+EI  
Sbjct: 370 NIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRTLAQRTSESTREIES 429

Query: 453 MLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQ 512
           M+ +L QGV  AV SM     + +     +     +L  I  +V  I  +    A+AA++
Sbjct: 430 MIESLQQGVKSAVNSMEQGIAQVDNANESTNAAGSALQDIVASVDSITQLNTHIATAADE 489

Query: 513 QSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           QS VAE INQ+++AI  I  E +++          L+     M T VG F L
Sbjct: 490 QSCVAESINQSIIAISDIAQESTQAANDLSEAVHQLAQLAGHMRTQVGTFIL 541