Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 495 a.a., putative methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella amazonensis SB2B

 Score =  247 bits (630), Expect = 9e-70
 Identities = 143/372 (38%), Positives = 230/372 (61%), Gaps = 1/372 (0%)

Query: 194 QVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSR-GIAPLQHVVSSLQAVAAG 252
           +V   RA  EA L   ++  +    + L+ +++ + +++ +  I PL HVVS+++ VA+G
Sbjct: 124 EVTFTRAPIEARLSSLLLGLLAQGALILLLSMVVIVIILKKLVITPLAHVVSAMEDVASG 183

Query: 253 GGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASH 312
            GDLT R+ VESQDEIG +A AFNAF++++H  +T ++ +A  +   A  L   +   + 
Sbjct: 184 DGDLTRRLPVESQDEIGRLASAFNAFIEQIHATVTKVQETAAQLIEGAGTLGSLSGANNL 243

Query: 313 KMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGE 372
           ++     ET+  V AV+++SA+A EVA N   T++A   A++Q+  +Q+  + ++    +
Sbjct: 244 RVQEQRQETEAAVTAVSQLSASAAEVAGNALRTSEAAAEADAQVDESQRRFDQSLGLTRQ 303

Query: 373 LVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVV 432
           LV+E+++ + +V  L Q+  KI +V+ VI  IAEQTNLLALNAAIEAARAGEQGRGFAVV
Sbjct: 304 LVDELSRCAISVQQLQQETQKIDEVVVVINSIAEQTNLLALNAAIEAARAGEQGRGFAVV 363

Query: 433 ADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGI 492
           ADEVR+LASRTQ +T EI +M+  +   V+  V  M  SQ+  +K+  ++ +IK  LA +
Sbjct: 364 ADEVRTLASRTQQATGEIQKMIQQVQTRVNDTVTVMGASQQLSDKSLSQAEEIKSMLASV 423

Query: 493 SKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSG 552
           ++ VS I+ M  + A AA +Q++V E+I+++L  +  I    S            L   G
Sbjct: 424 TRLVSNINAMNTEVAHAASEQTSVTENISRSLNDLAGISGSASADSASLAQSGERLFQQG 483

Query: 553 QQMGTLVGHFKL 564
           +++  LV  F+L
Sbjct: 484 ERLRALVNSFRL 495