Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 547 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  243 bits (620), Expect = 1e-68
 Identities = 179/583 (30%), Positives = 290/583 (49%), Gaps = 62/583 (10%)

Query: 6   MLSSLRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAY 65
           ML  L  RT+LL + ++ L+ + AL     +            N R+ ++D +K +++A 
Sbjct: 1   MLDQLSLRTRLLAVVLVALLGVLALAAIAAF------------NTRSLMLDERKGQIRA- 47

Query: 66  LMMGVTAVKPLYESDKAGEN------QAQAKQILKAMRFDS-DG---YFFAYDSQGVNTL 115
           +  G   V   Y+S +A  N      QA AK  ++ +RF+  DG   YF+ +   G++ +
Sbjct: 48  ITQGAYNVVAYYQSQEAAGNLSRDEAQAHAKAAVRQIRFNGPDGKSDYFYIWTPDGISVM 107

Query: 116 HAIKPELEGKNLYG-MKDENGVAVIAGLID--------------ASKTGDGFLYFSWHKP 160
           HA+KPE EGK +   +KD +G  +I  L                  K GD  +Y      
Sbjct: 108 HALKPEWEGKPMGDQVKDGSGKLIIRELASLLQNQATTYMDTQFVKKAGDPTMY------ 161

Query: 161 TINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVG 220
                 PK+ YA+  P WDW++GTG+YID+VD      R  ++  +Y  +++ + L+++G
Sbjct: 162 ------PKVLYAQKFPAWDWIIGTGVYIDEVD------REFQQTLIYQGLLALVVLALIG 209

Query: 221 LVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMD 280
            +  ++  SVL   G  P     + +Q VA  GG+L A I    Q + G +  A +  + 
Sbjct: 210 SICYLVTRSVLKQIGGEPAA-ATAIMQQVA--GGNLHAAI---GQTQPGSLLHALSQMVL 263

Query: 281 KLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVAS 340
            L  ++T+IR  A T+ + +Q +   +SQ +         T  + AA+ +++ ++  ++ 
Sbjct: 264 SLRQMLTEIRQDAETLASNSQAISSASSQLADTTGAQADATSSMAAAIEQLTVSSSHISD 323

Query: 341 NTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKV 400
           +   T      A       ++    A + +  +   V++ S  +  L QQA +I+ +  V
Sbjct: 324 SAEETQGDSHKAVDLSKQGRERAEQAAEAMQRIAATVSEGSTRIRTLDQQANQISSIAGV 383

Query: 401 IGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQG 460
           I DIA QTNLLALNAAIEAARAGE GRGFAVVADEVR LA RT ++T EI +M+ ++   
Sbjct: 384 IKDIAGQTNLLALNAAIEAARAGEAGRGFAVVADEVRKLAERTSSATIEIEQMIASIQSE 443

Query: 461 VSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDI 520
            + AVQSM+ +  + E+    +    ESLA I        +   + A+A  +QSA +  I
Sbjct: 444 TNNAVQSMDDALPQVEQGVSLAQAAAESLANIEAGALRTLEHIQEVANAIREQSAASTSI 503

Query: 521 NQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFK 563
            Q + AI Q V E S +   T + +  L      +  LV  F+
Sbjct: 504 AQRVEAIAQTVEETSTTMNNTMTSAQDLERVAHNLKGLVNRFQ 546