Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 539 a.a., methyl-accepting chemotaxis protein from Dechlorosoma suillum PS

 Score =  254 bits (650), Expect = 5e-72
 Identities = 172/562 (30%), Positives = 287/562 (51%), Gaps = 49/562 (8%)

Query: 19  LTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYLMMGVTAVKPLYE 78
           LTV  L+ +  L++   +Q+          + +  L+  +K  L+  + + +TA+  +  
Sbjct: 11  LTVSLLVTLIGLIVLGTFQA---------LHLKQQLLADRKATLETAIDIAMTAIVDIQA 61

Query: 79  SDKAG-----ENQAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDE 133
            +  G     E Q  AK ++++MR+    YF+ YDS+G+  +H ++PE EGK+ +  +D+
Sbjct: 62  QEAKGAMGREEAQTLAKAVIRSMRYQGKEYFYIYDSKGMGVMHPVRPEYEGKSHWDRQDK 121

Query: 134 NGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDT 193
           +G   +  LI  +    G+      KP  + Q PKL Y ++ P WDWV+GTG+YIDD+DT
Sbjct: 122 SGAYTVRNLIKVALDKSGYTETMTAKPGSDVQVPKLQYLQHFPAWDWVVGTGLYIDDLDT 181

Query: 194 QVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSR------GIAPLQHVVSSLQ 247
                       L+ Q +  + L +V +V  + A+S   +R      G  P +  V++++
Sbjct: 182 ------------LFYQQLRLVALIIVLVVLAVGALSWARARATLGQIGGEPAE-AVTAIR 228

Query: 248 AVAAGGGDLTARIKVESQDE-IGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQ 306
           AVA  GGDLT  +     D  +G++    N  +  L  ++ +I   A  V ++AQE++  
Sbjct: 229 AVA--GGDLTVSLGNARDDSMLGEL----NRLVQVLRQMIGEIAQGAGQVASSAQEINST 282

Query: 307 TSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLA 366
            ++ +         T  + AA+ E++ +   V+ N   T Q   +A     V +K V+  
Sbjct: 283 ATRVADSAATETEATQNMAAAMEELTVSITHVSDNARDTEQHASNAAELAGVGEKSVDTT 342

Query: 367 IDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQG 426
              I  + + + + +  V  L+  A ++ +V +VI +IA QTNLLALNAAIEAARAGEQG
Sbjct: 343 AANIATMADTMGKAAEQVRALTDNAQEVARVAQVIKEIAGQTNLLALNAAIEAARAGEQG 402

Query: 427 RGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIK 486
           RGFAVVADEVR LA RT+ +T EI  +++ +      A Q M+ +    EK    + +  
Sbjct: 403 RGFAVVADEVRVLAERTEKATVEISSIVSRIQDETLTAAQVMDAALPEAEKAKEAAAETS 462

Query: 487 ESL----AGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTE 542
           E L    AG   A SL+ ++   T   +E  +A+A+ + +    I   V E SES + T 
Sbjct: 463 ELLHRIAAGSESARSLVREVADSTREQSEASTALAQQVER----IAHQVEETSESMQHTA 518

Query: 543 SVSASLSHSGQQMGTLVGHFKL 564
           + SA L  + Q +      F++
Sbjct: 519 AASA-LEATAQALNQATARFRI 539