Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 607 a.a., methyl-accepting chemotaxis sensory transducer with Cache sensor (RefSeq) from Desulfovibrio vulgaris Miyazaki F

 Score =  209 bits (531), Expect = 3e-58
 Identities = 169/610 (27%), Positives = 289/610 (47%), Gaps = 77/610 (12%)

Query: 15  KLLLLTVIPLIVITALVMAVNYQSGLSTLQKE-LENYRTDLIDAKKKELQAYLMMGVTAV 73
           +++ L V  ++ +T +V A  + + + T++   +   +  +++ +K +LQ        A+
Sbjct: 10  RVIALLVFMVLFVTGVVGA--FVATIDTVKDHGVTETQQVMLEEEKAKLQVATHSVALAL 67

Query: 74  KPLYESDKAGENQA----QAKQILKAMRFDSD--GYFFAYDSQGVNTLHAIKPE--LEGK 125
             L     A   +A      ++ +  +RF+ D  GY+F Y  QG   + A+ P   ++GK
Sbjct: 68  GQLLADVPADAGEAARIEMVRKAIDTIRFEKDQSGYYFVY--QGTTNV-ALPPNKSVQGK 124

Query: 126 NLYGMKDENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTG 185
           +L   KD+NGV  +  L   + +G GF+ + + KP    Q PKL YAE +P   + +GTG
Sbjct: 125 DLSETKDKNGVYFVRELAQRASSGGGFVEYIFPKPGKGDQ-PKLAYAEMIPGTRFWIGTG 183

Query: 186 IYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSV-LVSRGIAPLQHVVS 244
           +YID++D   +   A  E      +   + +    L+  +I V + L++  + PL+   +
Sbjct: 184 VYIDNIDDAKSAINATLEGLANKALTWQLSVMAAILLLVVIPVCIMLIASIVRPLREATT 243

Query: 245 SLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDI--------------R 290
           + QAVA   G+L  RI+   +DE+  +  A N  +  L   + DI              R
Sbjct: 244 AAQAVAE--GNLEVRIEARGRDEVSALQAALNTMVTTLKNNIADITEKQREAGRQADAAR 301

Query: 291 AS-----------------------------ANTVEAAAQELDQQTSQASHKMDGHCLET 321
           AS                                ++ AA ++ +++ + S   D      
Sbjct: 302 ASTQQAEEAMAKAAVATKEGILTAAERLEGVVRAIDHAADDISRRSEEISRGTDTQMARI 361

Query: 322 DKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTS 381
           ++   A+ EM+AT  EVA N    A   E++ ++       V   +  + +L    +   
Sbjct: 362 NETATAMEEMNATVLEVARNAGRAADQTEASRTKADEGSGMVGQTVKAMQDLKGLASNLK 421

Query: 382 AAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLAS 441
             +  L QQ+  I  V+ VI DIA+QTNLLALNAAIEAARAG+ GRGFAVVADEVR LA 
Sbjct: 422 DNMHRLGQQSEAIGHVMNVINDIADQTNLLALNAAIEAARAGDAGRGFAVVADEVRKLAE 481

Query: 442 RTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAG-----ISKAV 496
           +T  +TKE+G+ +        KA+Q +  +   G   A+ ++     L+G     + + V
Sbjct: 482 KTMGATKEVGDSI--------KAIQDLARTNVTGMDDAVNAIDGAARLSGSSGELLQEIV 533

Query: 497 SLIHDMGIQT---ASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQ 553
           ++ HD   Q    A+AAE+QSA +E+I +++  I +I  E       T +   +L+    
Sbjct: 534 TMAHDAAGQVQAIATAAEEQSAASEEITRSVEEIDRIARETGTLVNATNTDLRNLADQAA 593

Query: 554 QMGTLVGHFK 563
           ++  L+   K
Sbjct: 594 ELRRLIEGMK 603