Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 558 a.a., methyl-accepting chemotaxis sensory transducer from Marinobacter adhaerens HP15

 Score =  278 bits (711), Expect = 4e-79
 Identities = 170/568 (29%), Positives = 300/568 (52%), Gaps = 25/568 (4%)

Query: 7   LSSLRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYL 66
           +S L+  TK+ L   +PL++++ L+  +     +   ++ L++   +L++A+K  LQ  L
Sbjct: 4   ISDLKVSTKITLSVALPLLILSGLLTYIGVTRLIEYSEEGLDSLEIELVEARKAGLQQ-L 62

Query: 67  MMGVTAVKPLYESDKAGENQAQAKQI---LKAMRFDSDGYFFAYDSQGVNTLHAIKPELE 123
           +  VT+     +++  G  + Q +++   LK++ F    Y FAY+ +           LE
Sbjct: 63  VEAVTSAAMELKNESPGSVEEQQRRVIDFLKSVSFGDQNYVFAYNRK-----------LE 111

Query: 124 GKNLYGMKDENGVA-------VIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLP 176
              ++G   ++GV        ++  L  A++   GF YF W  P      PK+ Y   +P
Sbjct: 112 YMTVHGDPSKDGVTEDRQVKQLLKDLFKAAEDS-GFHYFEWGNPATGNIEPKVAYVRLIP 170

Query: 177 KWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGI 236
            WDW+LG G+Y+ D+  QV     + +A +   + + I +S+V      I +  +VSR +
Sbjct: 171 GWDWMLGAGVYMKDISEQVETSAQKSQATIESVIWNMIAISLVAFAGFAI-LGYIVSRTV 229

Query: 237 A-PLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANT 295
             PL   V  ++ +A G GDL +R+    QDE+G++A  FN F+DK+  ++ D+  ++  
Sbjct: 230 TKPLHQTVKLMEEIAVGDGDLGSRLPDTRQDELGEMAHWFNLFVDKIKNVVIDVSETSRL 289

Query: 296 VEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQ 355
           ++     LD+   +    ++    +TD+V  +++E++ T +++A N          A + 
Sbjct: 290 LKDDTDLLDENVHETRRSINIQEQDTDQVAVSLSELATTTQQIAENCNFANSGSADAENL 349

Query: 356 IAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNA 415
           +       + +++ + EL   +++++  +  LS+++  I+Q+L VI  ++EQTNLLALNA
Sbjct: 350 VKNGVSLTSSSMEQMAELNTSISESARKITGLSERSKDISQILDVIHSVSEQTNLLALNA 409

Query: 416 AIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERG 475
           AIEAARAGE GRGFAVVADEVR LASR+  S   I E+L    +    A   M + +++ 
Sbjct: 410 AIEAARAGEHGRGFAVVADEVRQLASRSAESADSIQELLEQFIEETKDAAVQMELIEQKT 469

Query: 476 EKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELS 535
            +T       +ESL GI+ +V  +H+   Q A+A E+QS+VAE++ QNL  I        
Sbjct: 470 NRTNGSIKNAEESLKGIAVSVESMHEQITQVATATEEQSSVAEEVAQNLDRIVNTTKNNR 529

Query: 536 ESFKQTESVSASLSHSGQQMGTLVGHFK 563
            S +   S S S+    +++  LV  FK
Sbjct: 530 ASMESISSTSESVKELSERLRNLVEQFK 557