Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 541 a.a., methyl-accepting chemotaxis protein (NCBI) from Shewanella oneidensis MR-1

 Score =  219 bits (558), Expect = 2e-61
 Identities = 133/373 (35%), Positives = 221/373 (59%), Gaps = 4/373 (1%)

Query: 194 QVAEFRAQREADLYDQMISAIGLSVVGLVFTI-IAVSVLVSRGIA-PLQHVVSSLQAVAA 251
           ++A+     + +LYD  I+ I +++ GL   + I + + V R +  P+  +V +L+ +  
Sbjct: 171 KIADKEIAVDKELYDSSIT-IFITLAGLAILLSILIGLWVKRSVMNPINDIVRNLKTIRQ 229

Query: 252 GGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQAS 311
              DLT +    + DE+G ++ +    ++ L  ++  I  +ANTV ++A EL   T + +
Sbjct: 230 DS-DLTVKFHTFNDDELGLISTSLTQVIEHLRGILHSIAEAANTVTSSATELSSFTQETN 288

Query: 312 HKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIG 371
            +M     ET++   A+ EM+AT  EVA +T + A + + A++  A   + V  +I  + 
Sbjct: 289 KRMQQQQAETEQTATAMNEMTATVAEVAQSTSAAANSAKDADTYAANGNRIVIDSISSMS 348

Query: 372 ELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAV 431
           +L  ++ +T+  +G LS ++  I +VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAV
Sbjct: 349 QLSEQIQKTAQVIGFLSNESQNIGRVLDVIKSIAEQTNLLALNAAIEAARAGEQGRGFAV 408

Query: 432 VADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAG 491
           VADEVR+LA RTQ ST+EI  M+  L QGV +AV +M +  ++ +    ++ Q  ++L  
Sbjct: 409 VADEVRTLAQRTQKSTQEIEAMIATLQQGVKQAVSAMEVGIKQVDDANNKANQAGQALKE 468

Query: 492 ISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHS 551
           I  +V  I ++    A+AAE+QS+VAE+IN++++AI  I ++ + S  +      +L+  
Sbjct: 469 IVASVDNIAELNTHIATAAEEQSSVAENINRSIIAISDITDDATRSALELSESVINLTKL 528

Query: 552 GQQMGTLVGHFKL 564
              M + V  F+L
Sbjct: 529 ANSMRSQVSAFRL 541