Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 630 a.a., methyl-accepting chemotaxis protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  234 bits (597), Expect = 8e-66
 Identities = 148/398 (37%), Positives = 221/398 (55%), Gaps = 12/398 (3%)

Query: 168 KLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIA 227
           +L Y   +P  DW L   +   ++ +Q                +SA+G+ ++ ++F ++ 
Sbjct: 244 QLVYVAAVPSTDWALIFVMNKQEIMSQATSLA---------WWMSAVGVGLL-VIFGLVL 293

Query: 228 VSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKV-ESQDEIGDVAKAFNAFMDKLHPLM 286
           V++   +    L+ V  +L  +A G GDLT RI    S DEIG +A  FN F+++LH ++
Sbjct: 294 VAIFKMQ-FKDLERVALALNDIAEGDGDLTVRIHTANSHDEIGILASGFNRFVERLHGMI 352

Query: 287 TDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTA 346
           + +   A  +E  A+      +  S +++    E   V  AVTEM++   E+ASN   TA
Sbjct: 353 SRMHNIAGQLEYQAKGSSASAADNSQRIEVQQDEVTMVATAVTEMASATEEIASNAEHTA 412

Query: 347 QAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAE 406
           Q  ++A S     QK+V  +   I  L NEV+     + +L++ + KI  +L  I  IAE
Sbjct: 413 QTAQNAVSLSNHGQKQVMQSQQSIRNLANEVDTAGRIISELNEHSQKINSILLTISGIAE 472

Query: 407 QTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQ 466
           QTNLLALNAAIEAARAGEQGRGFAVVADEVR L+ RT +ST+EI  M+  L Q   KAV+
Sbjct: 473 QTNLLALNAAIEAARAGEQGRGFAVVADEVRVLSQRTHSSTQEIQAMIETLQQTAGKAVK 532

Query: 467 SMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVA 526
           SM  S +  E +  ++    ESL  ISKA++ I DM  Q A+AAE+Q++V  +IN+N  +
Sbjct: 533 SMTQSHDMAETSVADANSASESLLQISKAINEISDMASQIATAAEEQTSVTSEINRNTES 592

Query: 527 IQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
           I+++   LS   +     S  L+H    +   V  FKL
Sbjct: 593 IREVSENLSIEAQSAMVQSQELAHLAASLQQEVSRFKL 630