Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 603 a.a., methyl-accepting chemotaxis protein, putative (TIGR) from Desulfovibrio vulgaris Hildenborough JW710

 Score =  225 bits (573), Expect = 4e-63
 Identities = 178/616 (28%), Positives = 289/616 (46%), Gaps = 74/616 (12%)

Query: 6   MLSSLRSRTKLLLLTVIPLIVITALVMAVNYQ----SGLSTLQKELENYRTDLIDAKKKE 61
           ML +    T+++ L V  ++ +  ++ A ++     SGL      +E  +  +++ +K +
Sbjct: 1   MLRNYSIATRVIALLVFMVLFVGGVMAAYHHTIDKVSGLG-----VEETQKVMLEQEKMK 55

Query: 62  LQAYLMMGVTAVKPLYESDKAGENQAQAKQILKAM---RFDSD--GYFFAYDSQGVNTLH 116
           LQ        A+  L  +    +++A+   I KA+   RF+ D  GYFF Y    VN   
Sbjct: 56  LQVATHSASLALGEL--TAHLTDDEAKVAAIRKAIDGIRFEKDKSGYFFVYRGT-VNVAL 112

Query: 117 AIKPELEGKNLYGMKDENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLP 176
             K E++GK+L G KD+N V  +  L   +  G GF+ + + KP    Q PKL YAE +P
Sbjct: 113 PTKKEVQGKDLGGAKDKNNVFYVRELSQRAAQGGGFVEYVFDKPGKGDQ-PKLAYAEAIP 171

Query: 177 KWDWVLGTGIYIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGI 236
             D+ +GTG+YID++D             + D++     +    LV  +I + VL+  GI
Sbjct: 172 GTDYWIGTGVYIDNIDATKTAISKDMGDVVADEVTRLFLIIAAVLVLGVIPLCVLIITGI 231

Query: 237 A-PLQHVVSSLQAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRAS--- 292
             PL+    + Q VAAG  D+  RI  + +DE+  + KA N+ +  L   M DI+A    
Sbjct: 232 VRPLREATGAAQGVAAGNLDI--RIVEQGRDEVAQLQKALNSMVATLRTNMDDIKAKEAE 289

Query: 293 ----------------------------------------ANTVEAAAQELDQQTSQASH 312
                                                      +  A  +L+++      
Sbjct: 290 ANRQADVARDAARQADEARMKAAAATREGMLTAASRLEGVVKRINGATSDLERRAGDIDR 349

Query: 313 KMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGE 372
             D       +   A+ EM+AT  EVA N    A+  +S+ +Q     + V+  +  + +
Sbjct: 350 GTDNQLARIGETATAMEEMNATVLEVARNAGRAAEQTDSSRAQAENGAEMVSRTVKAMED 409

Query: 373 LVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVV 432
           L          +  L QQ+  I  V+ VI DIA+QTNLLALNAAIEAARAGE GRGFAVV
Sbjct: 410 LKQLATGLKDNMHRLGQQSEAIGHVMNVINDIADQTNLLALNAAIEAARAGEAGRGFAVV 469

Query: 433 ADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAG- 491
           ADEVR LA +T  +TKE+G+ + A+ QG+++     N+       +A++      S +G 
Sbjct: 470 ADEVRKLAEKTMGATKEVGDSIRAI-QGLART----NVDSMDEAVSAIDGAARLSSSSGD 524

Query: 492 -ISKAVSLIHDMGIQT---ASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSAS 547
            + + V   HD   Q     +AAE+QSA +E+I +++  I +I  +  E  +   +    
Sbjct: 525 LLKEIVRTAHDAAGQVQAIVAAAEEQSAASEEITRSVEDINRIARDSGELIRAANNDIRD 584

Query: 548 LSHSGQQMGTLVGHFK 563
           L+   +++  L+   K
Sbjct: 585 LAEQAEELHQLINALK 600