Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 554 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  444 bits (1143), Expect = e-129
 Identities = 243/558 (43%), Positives = 356/558 (63%), Gaps = 4/558 (0%)

Query: 7   LSSLRSRTKLLLLTVIPLIVITALVMAVNYQSGLSTLQKELENYRTDLIDAKKKELQAYL 66
           +S+L  R KLLLL++ PLI+   ++M V+Y     +L +E+  +RT L+  +K++++   
Sbjct: 1   MSNLSLRNKLLLLSLFPLILTLLVLMTVSYYVEQESLAEEVVTFRTKLVGERKQQIKEAT 60

Query: 67  MMGVTAVKPLYESDKAGENQAQAKQILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKN 126
            +    V+  Y+     ++Q    Q L+ +RF S GYFF YDSQG N  HA+ P LEG+N
Sbjct: 61  EIAAGIVQ--YQLSL--KDQGNVNQALRDIRFGSAGYFFIYDSQGKNIFHALMPNLEGQN 116

Query: 127 LYGMKDENGVAVIAGLIDASKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGI 186
              M D  G  +I GL+DA+K GDG   + + KP  N Q  K+ Y   +P  DW+LGTG 
Sbjct: 117 KIDMTDPRGTKIIVGLLDAAKRGDGNFSYYYQKPNTNEQIEKISYVMMVPGTDWMLGTGA 176

Query: 187 YIDDVDTQVAEFRAQREADLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSL 246
           YIDD++  V ++R      + D+    + +++V    T   + V   R + P++++  SL
Sbjct: 177 YIDDIEAVVEDYRQTVTEQMADKSFMILLIALVLTGITAFIIMVAAHRMVVPIKNMADSL 236

Query: 247 QAVAAGGGDLTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQ 306
             +A G GDLT R+ V+ +DEI  + +AFN F+DKL  ++ D+  +   V++AA  +  Q
Sbjct: 237 NDIAKGEGDLTKRLSVKGEDEIAQLGQAFNLFVDKLQTIIGDVANATAKVKSAANAIHDQ 296

Query: 307 TSQASHKMDGHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLA 366
           T   S ++  H  ETD+VV A+TEMS+TA EVA NT   A+A ++A   +A AQ+ V+ +
Sbjct: 297 TKVMSSQLLSHNNETDQVVTAITEMSSTASEVAQNTTQVAEATQAATGDVANAQRCVDAS 356

Query: 367 IDGIGELVNEVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQG 426
           ++ I  L++++N  + ++  LS+Q+ KI  VL VIG IAEQTNLLALNAAIEAARAGEQG
Sbjct: 357 LEEIAGLMSQINNAAGSIKSLSEQSQKINSVLSVIGGIAEQTNLLALNAAIEAARAGEQG 416

Query: 427 RGFAVVADEVRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIK 486
           RGFAVVADEVR+LASRTQ ST EI EML+ LH+ VS AV++M+ SQ+   ++   S  I 
Sbjct: 417 RGFAVVADEVRNLASRTQASTLEINEMLSELHKLVSVAVKTMDESQQSCVRSVDSSRAIS 476

Query: 487 ESLAGISKAVSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSA 546
           ESL  ++ AV+ I+DM  Q A+AA +QS+V E+IN+N+ AIQ+IVNEL  S +    VS 
Sbjct: 477 ESLGSVTSAVTAINDMSTQIATAATEQSSVTEEINRNVYAIQEIVNELLHSSEDAAKVSQ 536

Query: 547 SLSHSGQQMGTLVGHFKL 564
           ++S  G  +G LVG FK+
Sbjct: 537 TVSQEGINLGKLVGQFKI 554