Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 706 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  215 bits (547), Expect = 5e-60
 Identities = 132/367 (35%), Positives = 217/367 (59%), Gaps = 11/367 (2%)

Query: 205 DLYDQMISAIG--LSVVGLVFTIIAV---SVLVSRGIAPLQHVVSSLQAVAAGGGDLTAR 259
           D  D+M +++G  L +VGL  +I+AV   S+++   IAPL+ +   ++ +A+  GDLT  
Sbjct: 342 DKMDEMATSLGSILLMVGLAVSILAVVTISIVIRSIIAPLKMIQGRVEHLASADGDLTQS 401

Query: 260 IKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEA---AAQELDQQTSQASHKMDG 316
           I V++  E+  + K FN+F+ KL  L+++++  A   +    ++ ++ + T  + H+  G
Sbjct: 402 IVVDAHAELIALGKGFNSFIHKLKDLISELKTLAGRTQEESLSSAQIAELTHDSVHRQYG 461

Query: 317 HCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNE 376
              E + VV AV EMSATA EVA  +  TA   E+ +  + ++++ +  A++ +  +  E
Sbjct: 462 ---EIESVVTAVNEMSATALEVAKASEQTAAETEAMSRNVRLSEESLTKAMEYVTTMSQE 518

Query: 377 VNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEV 436
             Q   AV  +++ +  I+++L+VI  IA QTNLLALNAAIEAARAGEQGRGFAVVADEV
Sbjct: 519 SMQAKVAVSKVAESSTNISRILEVISSIAAQTNLLALNAAIEAARAGEQGRGFAVVADEV 578

Query: 437 RSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAV 496
           R+LAS+TQ+ST +I  +++AL Q V+ A   ++   ER +    ++ Q   SL  +   +
Sbjct: 579 RALASKTQSSTDDISVLIDALQQEVNSASGIIDKGAERAQMAVSQTEQALTSLNSMVSQI 638

Query: 497 SLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMG 556
             I       A+AAE+QSAV E++N+N+  I    +EL+    + +  S  L+   +Q  
Sbjct: 639 EEISSQVTHIAAAAEEQSAVTEEVNRNITGISDSASELARLAGEAQQSSVVLAELVKQQH 698

Query: 557 TLVGHFK 563
             +G  K
Sbjct: 699 QQLGKLK 705