Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 543 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  209 bits (533), Expect = 2e-58
 Identities = 131/369 (35%), Positives = 195/369 (52%), Gaps = 6/369 (1%)

Query: 202 READLYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAP------LQHVVSSLQAVAAGGGD 255
           +E DL     +     +   + T++A+  LV     P      ++ +   +  +  G G+
Sbjct: 174 KELDLQASEQATTQTQISVTIATLVAIVALVIAYFGPKIIVNAIRDITDRINDIVDGDGN 233

Query: 256 LTARIKVESQDEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMD 315
           LT RI +  QDEIG++A AFN F+ +L  ++  I +    V    + L  +++       
Sbjct: 234 LTQRIPITRQDEIGELANAFNLFVAQLQQMVIAIISQTKDVSQTVENLATKSTTTIGISY 293

Query: 316 GHCLETDKVVAAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVN 375
                 D +V AV EMSA  REVASN   TA  I   N Q    +  +  +++ I +L  
Sbjct: 294 EQEQFVDTIVTAVNEMSAAVREVASNALHTATEITKVNDQTIEGKNILTQSVNHIQQLSE 353

Query: 376 EVNQTSAAVGDLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 435
            V Q  A +  LS  +A I  VL VI  IAEQTNLLALNAAIEAARAGEQGRGFAVVADE
Sbjct: 354 SVKQAVAVIEKLSVNSANIASVLDVIRSIAEQTNLLALNAAIEAARAGEQGRGFAVVADE 413

Query: 436 VRSLASRTQNSTKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKA 495
           VR+LASRT+ ST++I  M+  L +GV+ AV+S+         T   + Q +++L  I  +
Sbjct: 414 VRTLASRTETSTQDIQRMIEELQRGVNDAVKSIESGASLTNSTVTLASQTQDALDEILNS 473

Query: 496 VSLIHDMGIQTASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQM 555
            S + +M  QTA+A E+Q+ V E+IN+NL  +       +   ++T+ +  +       +
Sbjct: 474 TSKVSEMSTQTATATEEQTHVTEEINRNLTELSDKTRYCNTVIQETQQIVVNTQTICSNL 533

Query: 556 GTLVGHFKL 564
              V  FK+
Sbjct: 534 QKEVSRFKV 542