Pairwise Alignments

Query, 564 a.a., methyl-accepting chemotaxis protein from Vibrio cholerae E7946 ATCC 55056

Subject, 638 a.a., methyl-accepting chemotaxis sensory transducer (RefSeq) from Shewanella sp. ANA-3

 Score =  229 bits (584), Expect = 2e-64
 Identities = 153/479 (31%), Positives = 240/479 (50%), Gaps = 32/479 (6%)

Query: 91  QILKAMRFDSDGYFFAYDSQGVNTLHAIKPELEGKNLYGMKDENGVAVIAG-----LIDA 145
           ++L + + +  G+ +  D++G   LH    ++   +L  +     ++ +       LID 
Sbjct: 187 RLLGSFKIEETGFVYLVDAKGEVKLHPDASQIGKSSLKSLYSGANISSLLNRSDFNLIDT 246

Query: 146 SKTGDGFLYFSWHKPTINAQAPKLGYAEYLPKWDWVLGTGIYIDDVDTQVAEFRAQREAD 205
              G+     S                 Y+P  DW L   +   +V   + +  A  +  
Sbjct: 247 QIQGENTFVAS----------------SYIPSMDWYLVAQVPEAEVFALLTD--AAYQIL 288

Query: 206 LYDQMISAIGLSVVGLVFTIIAVSVLVSRGIAPLQHVVSSLQAVAAGGGDLTARIKVESQ 265
           ++  +I+A      G +   I V+  VSR   P+  V +  + +  G GDL  R+ V+ +
Sbjct: 289 IWTLIIAA------GFIMLAIVVAGSVSR---PIAQVAAMFRDIGEGEGDLRQRLPVKGE 339

Query: 266 DEIGDVAKAFNAFMDKLHPLMTDIRASANTVEAAAQELDQQTSQASHKMDGHCLETDKVV 325
           DEI  +A+ FN+F+ K+   + ++  ++  +  +A+++  Q  Q           T  VV
Sbjct: 340 DEIAQLAQGFNSFISKIQDSVIEVAQTSEQLGFSAKDVSNQAQQTLEDSHEQKDRTMMVV 399

Query: 326 AAVTEMSATAREVASNTYSTAQAIESANSQIAVAQKEVNLAIDGIGELVNEVNQTSAAVG 385
            A+ EM AT  E+ASN    A A + A+++    Q  V  A D I +L  +V Q    + 
Sbjct: 400 TAINEMGATVNEIASNAAQAAVAAKDADTESNSGQVVVTRARDTINQLSQDVEQVGEVIE 459

Query: 386 DLSQQAAKITQVLKVIGDIAEQTNLLALNAAIEAARAGEQGRGFAVVADEVRSLASRTQN 445
            L+     I  +L VI  I+EQTNLLALNAAIEAARAGE GRGFAVVADEVR+LASRT  
Sbjct: 460 SLATHTKSIGGILDVIRAISEQTNLLALNAAIEAARAGEAGRGFAVVADEVRNLASRTAA 519

Query: 446 STKEIGEMLNALHQGVSKAVQSMNISQERGEKTALESVQIKESLAGISKAVSLIHDMGIQ 505
           ST E+  M++ L    S+AV +M  S+ R  +      +  +SL GIS  + LI DM IQ
Sbjct: 520 STNEVQGMIDKLQSEASRAVNAMAQSRARSHEGVAAVDEASQSLVGISDRIGLISDMNIQ 579

Query: 506 TASAAEQQSAVAEDINQNLVAIQQIVNELSESFKQTESVSASLSHSGQQMGTLVGHFKL 564
            A+A E+QS V EDIN+N+  I +I    + + +     S +L+    ++ TLV  FK+
Sbjct: 580 VAAATEEQSTVVEDINRNVTEINEITQRTASTAQAAAQASLALNQLAHRLDTLVAKFKV 638