Pairwise Alignments

Query, 196 a.a., nucleoid occlusion factor SlmA from Vibrio cholerae E7946 ATCC 55056

Subject, 202 a.a., Transcriptional regulator, TetR family from Pseudomonas fluorescens FW300-N2E2

 Score = 50.8 bits (120), Expect = 2e-11
 Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 6/156 (3%)

Query: 9   RREEILQALAEMLESNEGASRITTAKLAKQVGVSEAALYRHFPSKARMFEGLIEFIEESL 68
           +RE ILQA      S+ G    +  K+A   GVS+  +Y HFPSK  +F  ++  +  S+
Sbjct: 11  KREAILQAAIAEFRSS-GFEITSMDKIAATAGVSKRTVYNHFPSKEELFAEILNRLWNSI 69

Query: 69  MSRINRIFDEEKDTLNRIRLVMQLLL-AFAERN-PGLTRILSGHALMFENERLRDRINQL 126
            +  +  +   K    +++ ++Q  L   A+ N   L RI    A +   ER RD ++++
Sbjct: 70  TAEQDMPYSPRKPLREQLQTLLQAKLHMLADENFLDLARIAIA-ATIHSPERARDMVSRM 128

Query: 127 FERIETSLRQILRERKLREGKSFPVDENILAAQLLG 162
            +R E  L   +R+ +  +G+  PV+    A Q+ G
Sbjct: 129 GQR-EEGLTAWIRQAQ-ADGRLKPVEPAFAAQQMHG 162