Pairwise Alignments

Query, 196 a.a., nucleoid occlusion factor SlmA from Vibrio cholerae E7946 ATCC 55056

Subject, 210 a.a., Transcription repressor of multidrug efflux pump acrAB operon, TetR (AcrR) family from Pseudomonas fluorescens FW300-N2E2

 Score = 46.6 bits (109), Expect = 3e-10
 Identities = 43/175 (24%), Positives = 83/175 (47%), Gaps = 13/175 (7%)

Query: 10  REEILQALAEMLESNE------GASRITTAKLAKQVGVSEAALYRHFPSKARMFEGLIEF 63
           +EE L+  +++LE+ E      G +R T A +A   GV+  A+Y HF +KA + + +++ 
Sbjct: 6   KEEALETRSQILEAAEKAFFERGVARTTLADIATLAGVTRGAIYWHFSNKADLLQAMLDT 65

Query: 64  IEESL--MSRINRIFDEEKDTLNRIRLVMQLLLAFAERNPGLTRI--LSGHALMFENERL 119
           + E L  ++R +   +EE D L   R ++  L      +P   RI  +  H   F +E  
Sbjct: 66  LHEPLDDLARASE-NEEELDPLGCTRKLLVQLFQQVALDPKTRRINEILFHKCEFTDEMC 124

Query: 120 RDRINQLFERIETSLRQILRERKLREGKSFP--VDENILAAQLLGQVEGSLNRFV 172
             R  +    ++ ++R +L      +    P  +D    A  + G ++G L +++
Sbjct: 125 DLRQQRRQVSLDCNVRIVLSLSNAMKRGQLPDDLDPERAAIAIHGYIDGILYQWL 179