Pairwise Alignments

Query, 196 a.a., nucleoid occlusion factor SlmA from Vibrio cholerae E7946 ATCC 55056

Subject, 214 a.a., transcriptional regulator, TetR family from Pseudomonas syringae pv. syringae B728a

 Score = 54.7 bits (130), Expect = 1e-12
 Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 13/194 (6%)

Query: 9   RREEILQALAEMLESNEGASRITTAKLAKQVGVSEAALYRHFPSKARMFEGLIEFIEESL 68
           RREE+L A  ++  S EG +  + AK+A  VG+S A L  HFPSK  +  G++E  +E  
Sbjct: 25  RREELLDAALQVF-SLEGYTGASVAKVAAIVGISVAGLLHHFPSKISLLMGVLERRDE-- 81

Query: 69  MSRINRIFDEEKDTLNRIRLVMQLLLAFAERN---PGLTR---ILSGHALMFENERLRDR 122
              +N     E  T N +  ++  L A    N   PG+ R   IL+  +L+ EN+   + 
Sbjct: 82  ---VNGRIAAEVRTDNTLTGLLGGLRAINRSNATAPGVVRAFSILNAESLL-ENQPAFEW 137

Query: 123 INQLFERIETSLRQILRERKLREGKSFPVDENILAAQLLGQVEGSLNRFVRSDFKYLPTA 182
               +ERI   L         R      VD + +  Q+L  ++G   +++R   +     
Sbjct: 138 FQTRYERIHAHLLGQFSALVERGEVRADVDLDKIIRQILAMMDGLQIQWLRFPDQVDLVE 197

Query: 183 NFDEYWALLSAQIK 196
            FD Y A + A ++
Sbjct: 198 CFDTYIAQVDAAVR 211