Pairwise Alignments

Query, 196 a.a., nucleoid occlusion factor SlmA from Vibrio cholerae E7946 ATCC 55056

Subject, 211 a.a., TetR/AcrR family transcriptional regulator from Rhodopseudomonas palustris CGA009

 Score = 45.1 bits (105), Expect = 9e-10
 Identities = 44/182 (24%), Positives = 78/182 (42%), Gaps = 15/182 (8%)

Query: 18  AEMLESNEGASRITTAKLAKQVGVSEAALYRHFPSKARMFEGLIEFIEESLMSRI-NRIF 76
           A  L + +G +  +  ++    GV +  +YR FPSK  +FEG++E      ++     + 
Sbjct: 29  ASRLFAQQGFAATSVEQVVAACGVGKDTVYRRFPSKLALFEGVVEHARVQTLAHFQTTMA 88

Query: 77  DEEKDTLNRIRLVMQLLLAFAERNPGL---TRILSGHALMFENERLRDRINQLFERIETS 133
            +  D L ++R   + LLA    +P L    RI    A++          + + +R+ + 
Sbjct: 89  SQTGDALTQLRAAARWLLA-VNVDPTLIAFKRIAFSEAIVVGQAVASRTDDPIMDRLLSL 147

Query: 134 LRQILRERKLREGKSFPVDENILAAQLLGQVE-GSLNRFVRSDFKYLPT----ANFDEYW 188
           + +  +   L  G     D   LA+QLL  +  G +   +     Y  T    A FD+ W
Sbjct: 148 IGEAQKAGALARG-----DARFLASQLLNSIAMGPMIEAMLGGTTYASTRAQNAYFDKAW 202

Query: 189 AL 190
           AL
Sbjct: 203 AL 204