Pairwise Alignments

Query, 196 a.a., nucleoid occlusion factor SlmA from Vibrio cholerae E7946 ATCC 55056

Subject, 205 a.a., transcriptional regulator, TetR family from Phaeobacter inhibens DSM 17395

 Score = 47.4 bits (111), Expect = 2e-10
 Identities = 44/177 (24%), Positives = 82/177 (46%), Gaps = 23/177 (12%)

Query: 8   NRREEILQALAEMLESNEGASRITTAKLAKQVGVSEAALYRHFPSKARMF-----EGLIE 62
           N R+ +++A   ++E+ +G +  T ++ AKQ GV+ AA+YRHF  +  +      +G I 
Sbjct: 10  NLRQALVEAALHLIEA-KGPTGFTLSEAAKQAGVTPAAVYRHFKGREDLIAEAGRQGYIM 68

Query: 63  FIEESLMSRINRIFDE-EKDTLNRIRLVMQLLLAFAERNPGLTRILSGHALMFENERLRD 121
           F +      +   +D+ +   L       +  LAFA ++PG       +  MFE+    +
Sbjct: 69  FAD-----LMQHAYDKYQPSALAAFEATGRAYLAFARKHPG------HYIAMFESGISVN 117

Query: 122 RINQLFERIETSLRQILRERKLREGKSFPVDE----NILAAQLLGQVEGSLNRFVRS 174
           R  +L E    + R IL        K  PV++    ++ +A +L    G +  + R+
Sbjct: 118 RTPELAEAANRA-RAILERAAADLSKHIPVEKRPPASMFSAHILAMSHGVVELYARN 173