Pairwise Alignments

Query, 318 a.a., lipid A biosynthesis lauroyl acyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 311 a.a., lipid A biosynthesis (KDO)2-(lauroyl)-lipid IVA acyltransferase (RefSeq) from Shewanella loihica PV-4

 Score =  114 bits (285), Expect = 3e-30
 Identities = 81/305 (26%), Positives = 135/305 (44%), Gaps = 4/305 (1%)

Query: 8   KYSKPEFSFSLLHPKYWGVWLGFGLLALLVNLLPYPVLLKIGRGLGQFSMRFGKKRVHIA 67
           KY    F   LLHPK+W  W   G+L     L+P  +   I R L +   +  KK + +A
Sbjct: 6   KYFDRRFRAELLHPKHWPTWFAIGVLVFF-GLMPAWLRDPIARLLARLVKKIAKKPLKVA 64

Query: 68  RRNLELAFPTMSQSEIDAFVLENFKNTGAALIETGITWFWPTWRFKRILIDKDTQAIRQH 127
           R NLE  FP  S++EID  + EN ++    L+             +R +     + +++ 
Sbjct: 65  RANLETCFPDKSKAEIDKLLDENIESFVLILLAQSELLLRSDANLRRRVQLDGFEHVQRA 124

Query: 128 AKTGQGVLLCCVHALNLEITARAFAVLGIGGYGVYRPHSNPAYEFIQYRGRT-RNGNQLI 186
              GQ V+    H   +E        L +    + + H N  +++   R R+ + GN  +
Sbjct: 125 RDAGQPVIFIMPHVWGIEYAGLRLN-LELPMVTMAKAHRNKLFDWFNNRMRSSKGGNVYM 183

Query: 187 NRTDIKQMIRVLRQGERLFYLPDQDYGHNKSVFVPFFAVEEACTTTGTSILAYTSHCAIV 246
               I+ ++  L+     FYLPD+D G  KSVF PF    +A       + +  +   + 
Sbjct: 184 REAGIRALLSELKNDNSFFYLPDEDLGPEKSVFAPFLGTVKATLPVVGRLASAGNAQVMP 243

Query: 247 IGSGFRNAQGRYEIMADKSIEADYPQKDETAAAAYMNKFVEEIILRAPEQWMWLHKRFKS 306
           +  G+   + +Y +     I  +  Q  E  A A +N+ VE++I   PEQ+MW  K  ++
Sbjct: 244 VKIGYDQQKRQYLLTVLPPISPEEMQGKENEALA-LNRAVEQVINAYPEQYMWFLKLLRT 302

Query: 307 LPDYE 311
            P  E
Sbjct: 303 RPPGE 307