Pairwise Alignments

Query, 318 a.a., lipid A biosynthesis lauroyl acyltransferase from Vibrio cholerae E7946 ATCC 55056

Subject, 312 a.a., lipid A biosynthesis acyltransferase, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  117 bits (292), Expect = 5e-31
 Identities = 86/315 (27%), Positives = 140/315 (44%), Gaps = 24/315 (7%)

Query: 6   QDKYSKPEFSFSLLHPKYWGVWLGFGLLALLVNLLPYPVLLKIGRGLGQFSMRFGKKRVH 65
           Q K+    F  +LLHPKYW  WL  GLL +   ++P  +   I + L +  +   KK + 
Sbjct: 4   QTKHFDRRFQLALLHPKYWVTWLAIGLLVIF-GIMPAWLRDPIAKVLAKLVVPIAKKPIG 62

Query: 66  IARRNLELAFPTMSQSEIDAFVLENFKNTGAALIETGITWFWPTWRFKRILIDKDTQAIR 125
           IAR NL   FP  S +EI+  +  N +N    L+  G          +R +     + ++
Sbjct: 63  IARANLSACFPEKSAAEIETLINNNVENFVLVLLSQGELLIRSKAHLRRRVNLMGFEHVK 122

Query: 126 QHAKTGQGVLLCCVHA---------LNLEITARAFAVLGIGGYGVYRPHSNPAYEFIQYR 176
                GQ V+    H          LNLE+     A          + H N  + +   R
Sbjct: 123 AAQAAGQPVIFIMPHVWPIDYAGLRLNLELPMVTMA----------KAHKNGLFNWFNNR 172

Query: 177 GRTRNGNQLINR-TDIKQMIRVLRQGERLFYLPDQDYGHNKSVFVPFFAVEEACTTTGTS 235
            R+  G  +  R   I+ ++  L++    FYLPD+D G ++SVF PF    +A T     
Sbjct: 173 VRSSCGGHVYMREAGIRALLAELKRNNSFFYLPDEDLGPDQSVFTPFLGTVKA-TLPVVG 231

Query: 236 ILAYTSHCAIV-IGSGFRNAQGRYEIMADKSIEADYPQKDETAAAAYMNKFVEEIILRAP 294
            LA   +  ++ +  G+     ++++    +I  +     E  A A +NK VE++IL  P
Sbjct: 232 RLAQAGNAQVLPVKIGYNQVTRQFDLTVMSAIATEDMVGKENEALA-LNKAVEQVILAYP 290

Query: 295 EQWMWLHKRFKSLPD 309
           EQ+MW  +  K+ P+
Sbjct: 291 EQYMWFLRLLKTRPE 305