Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 701 a.a., polyribonucleotide nucleotidyltransferase from Pseudomonas stutzeri RCH2

 Score = 53.9 bits (128), Expect = 8e-12
 Identities = 62/219 (28%), Positives = 90/219 (41%), Gaps = 32/219 (14%)

Query: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPR------WLKGQG 55
           R D R    VR + I         GS L   G T+ L  A++  G  R       L+G+ 
Sbjct: 316 RIDGRDTRTVRGLNIEVGVLDKTHGSALFTRGETQALVVATL--GTARDAQLLDTLEGEK 373

Query: 56  KGWVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVD 115
           K      Y   P +     R  AT  ++ G      RL  R + A++         I V 
Sbjct: 374 KDPFMLHYNFPPYSVGECGRMGATGRREIGHG----RLARRGVAAMLPSADEFPYTIRVV 429

Query: 116 CDVIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED----V 171
            ++ +++G +  AS+ GAS+AL DA             PMK  VA +++G++ E     V
Sbjct: 430 SEITESNGSSSMASVCGASLALMDAGV-----------PMKAPVAGIAMGLVKEGEKFAV 478

Query: 172 LCDLEYVEDSAADTDMNVVMTEEGKM-----IEIQGTAE 205
           L D+   ED   D D  V  T +G       I+IQG  E
Sbjct: 479 LTDILGDEDHLGDMDFKVAGTAKGVTALQMDIKIQGITE 517