Pairwise Alignments

Query, 238 a.a., ribonuclease PH from Vibrio cholerae E7946 ATCC 55056

Subject, 717 a.a., polynucleotide phosphorylase/polyadenylase from Sinorhizobium meliloti 1021

 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 54/217 (24%), Positives = 85/217 (39%), Gaps = 28/217 (12%)

Query: 2   RPDNRAADQVRPIKITRHYTAYAEGSVLVEFGNTKVLCNASIEEGVPRW----LKGQGKG 57
           R D R    VRPI           GS L   G T+ +  A++  G        L G  K 
Sbjct: 317 RIDGRDLVTVRPIVAEVGILPRTHGSALFTRGETQAIVVATLGTGEDEQYVDSLTGMYKE 376

Query: 58  WVTAEYGMLPRATHSRTRREATNGKQGGRTMEIQRLIARSLRAVVDLEAMGEIMITVDCD 117
                Y   P +     R     G  G R +   +L  R++  ++         + V  +
Sbjct: 377 NFMLHYNFPPYSVGETGRM----GSPGRREIGHGKLAWRAIHPMLPTAEQFPYTLRVVSE 432

Query: 118 VIQADGGTRTASITGASVALADAFAHLIAKGQLKKNPMKGHVAAVSVGILGED----VLC 173
           + +++G +  A++ G S+AL DA             P+   VA +++G++ ED    VL 
Sbjct: 433 ITESNGSSSMATVCGTSLALMDAGV-----------PLAKPVAGIAMGLIKEDDRFAVLS 481

Query: 174 DLEYVEDSAADTDMNVVMTEEG-----KMIEIQGTAE 205
           D+   ED   D D  V  T+ G       I+I+G  E
Sbjct: 482 DILGDEDHLGDMDFKVAGTDAGITSLQMDIKIEGITE 518